WEHI-ResearchComputing

Pinned Repositories

alphafold2.0
Language:Python2 1 00
CarpentriesSlides
Converts Carpentries workbench workshops to slides
Language:R2 1 80
EnvironmentModules
A user friendly R front-end for the Environment Modules system. Offers a way to load and unload system packages on shared HPC (High Performance Computing) environments, through R.
Language:R2 1 70
FileSenderCli
Improved command line interface and Python API for interacting with FileSender servers
Language:Python4 1 141
Genomics-Metadata-Multiplexing
Genomics Metadata Multiplexing Repository
Language:R4 2 71
milton-contrib
Useful scripts and other files for the WEHI HPC
Language:Python2 2 03
MiltonIntro
An introduction to Spartan and Linux training course.
Language:HTML21
pdx-genome
Patient derived cancer xenograph genome analysis
Language:Common Workflow Language1 6 02
tarprof
Utilities for profiling Targets workflows
Language:R10
WEHI-ResearchComputing.github.io
This is the website for the RCP at WEHI
Language:HTML2 1 12

WEHI-ResearchComputing's Repositories

WEHI-ResearchComputing/FileSenderCli
Improved command line interface and Python API for interacting with FileSender servers
Language:Python4 1 141
WEHI-ResearchComputing/Genomics-Metadata-Multiplexing
Genomics Metadata Multiplexing Repository
Language:R4 2 71
WEHI-ResearchComputing/CarpentriesSlides
Converts Carpentries workbench workshops to slides
Language:R2 1 80
WEHI-ResearchComputing/EnvironmentModules
A user friendly R front-end for the Environment Modules system. Offers a way to load and unload system packages on shared HPC (High Performance Computing) environments, through R.
Language:R2 1 70
WEHI-ResearchComputing/WEHI-ResearchComputing.github.io
This is the website for the RCP at WEHI
Language:HTML2 1 12
WEHI-ResearchComputing/container-recipes
Container recipes created by the RCP team
Language:Roff1 1 00
WEHI-ResearchComputing/student-intern-organiser
Language:HTML1 2 303
WEHI-ResearchComputing/tarprof
Utilities for profiling Targets workflows
Language:R10
WEHI-ResearchComputing/haemosphere-introduction
Language:Python00
WEHI-ResearchComputing/bioconductor_maintenance
Repo to explore if bioconductor maintenance can be streamlined
WEHI-ResearchComputing/cryo_em_grid_detection_ai
cryo-EM Grid Detection
Language:Jupyter Notebook2 0
WEHI-ResearchComputing/DashAclEditor
Dash GUI for editing Posix file acess control lists (ACLs)
Language:Python
WEHI-ResearchComputing/data-commons
Language:HTML1
WEHI-ResearchComputing/docker-introduction
Reproducible Computational Environments using Containers
WEHI-ResearchComputing/DynamicDet
[CVPR 2023] DynamicDet: A Unified Dynamic Architecture for Object Detection
Language:Python
WEHI-ResearchComputing/genomics-invoicing
WEHI-ResearchComputing/git-novice
Version Control with Git
0 0
WEHI-ResearchComputing/lesson-R-packaging
R Packaging
WEHI-ResearchComputing/mdf-shell-novice
Software Carpentry introduction to the shell for novices.
Language:Python
WEHI-ResearchComputing/nf-alphafold
Language:Nextflow
WEHI-ResearchComputing/nf-malaria-variant-analysis
Language:R
WEHI-ResearchComputing/nf-template
A nextflow template repository
Language:Nextflow
WEHI-ResearchComputing/ResidBenchmarks
Benchmarking different ways to calculate residuals in R using a number of different packages.
2 0
WEHI-ResearchComputing/RFdiffusion_WEHI
Code for running RFdiffusion
Language:Python
WEHI-ResearchComputing/Service_Workbench_Templates
Templates for AWS Service Workbench from Relevance Lab
Language:Shell0 0
WEHI-ResearchComputing/student_intern_data_public
Public version
Language:Python1 22
WEHI-ResearchComputing/WEHI-Alphafold
Open source code for AlphaFold.
Language:Python
WEHI-ResearchComputing/wehi-shell-novice
The Unix Shell
Language:Shell
WEHI-ResearchComputing/Workshop-intermediate-slurm
Intermedate Slurm Workshop source code using the Software Carpentry Workbench style.
Language:R
WEHI-ResearchComputing/Workshop-IntroToHPC-Slurm
RCP Training introducing HPC concepts and SLURM
1 0