Pinned Repositories
cifti-matlab
MATLAB code for reading and writing CIFTI connectivity files
CiftiLib
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files
gradunwarp
Gradient Unwarping in Python
HCP
Main HCP repo, probably mostly python stuff.
HCPpipelines
Processing pipelines for the HCP
HCPpipelinesDocker
Files related to running the HCP Pipelines using Docker
NHPPipelines
Enhancements of HCP Pipelines for non-human primates
StructuralQC
workbench
Connectome Workbench
xnat_utilities
Some utilities for working with XNAT from the command line
WUSM Human Connectome Project's Repositories
Washington-University/HCPpipelines
Processing pipelines for the HCP
Washington-University/workbench
Connectome Workbench
Washington-University/cifti-matlab
MATLAB code for reading and writing CIFTI connectivity files
Washington-University/gradunwarp
Gradient Unwarping in Python
Washington-University/NHPPipelines
Enhancements of HCP Pipelines for non-human primates
Washington-University/CiftiLib
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files
Washington-University/HCP
Main HCP repo, probably mostly python stuff.
Washington-University/HCPpipelinesDocker
Files related to running the HCP Pipelines using Docker
Washington-University/StructuralQC
Washington-University/megconnectome
MEG data processing pipelines for the HCP Young Adult project
Washington-University/wb_shortcuts
Script for common short wb_command sequences
Washington-University/xnat_utilities
Some utilities for working with XNAT from the command line
Washington-University/hcp_functional_qc_pipeline_customizations
HCP Functional QC (aka Level2QC) pipeline
Washington-University/HCPpipelinesRunUtils
Utilities for running and checking completion status of HCP Pipelines
Washington-University/HCPpipelinesSingularity
Files related to running the HCP Pipelines using Singularity
Washington-University/HCPpipelinesXnatSingularity
Washington-University/monitor-hcp-pipelines
Washington-University/xnat_pbs_jobs
Scripts to run HCP Pipelines as XNAT aware PBS scheduled jobs
Washington-University/at_cmd_utils
Utility scripts for the at command
Washington-University/BALSA
Washington-University/CHPC_QuNex_RunUtils
Scripts and parameters files for running Qu|Nex container on the CHPC
Washington-University/get-data-for-vetting
Utility scripts to retrieve data from Connectome DB resources and place them in shared directories for examination and vetting
Washington-University/HAWG-examples
HAWG example JSON files
Washington-University/hcp_functional_qc_tools
Python based scripts required for Functional QC Pipeline (aka Level2QC Pipeline) for HCP-IntraDB
Washington-University/hcp_functional_qc_xnat_plugin
XNAT pages required for HCP QC as a plugin
Washington-University/HCPpipelinesXnatPbsJobs
Washington-University/pbs_utils
PBS Job Scheduler Utility Scripts
Washington-University/Pipeline_Environment_Setup_Scripts
Washington-University/RetinotopySkeleton
Washington-University/xnat_pbs_jobs_control
Control files for the scripts in the xnat_pbs_jobs repository