WenjianBI
Assistant Professor Department of Medical Genetics, School of Basic Medical Sciences, Peking University
Pinned Repositories
Bioinformatics
coxphf
:exclamation: This is a read-only mirror of the CRAN R package repository. coxphf — Cox Regression with Firth's Penalized Likelihood. Homepage: http://cemsiis.meduniwien.ac.at/kb/wf/software/statistische-software/fccoxphf/
EmpSPA
Empirical SaddlePoint Approximation implementation of GWAS for binary, time-to-event, or other traits
grab.github.io
math-as-code
a cheat-sheet for mathematical notation in code form
pheweb
A tool to build multi-phenotype GWAS browsers
POLMM
Proportional Odds Logistic Mixed Model (POLMM) for ordinal categorical data analysis
SPACox
GWAS for survival analysis in large cohorts
SPAGE
SaddlePoint Approximation implementation of GxE analysis
STEPS
Functions to conduct genetic association analyses of secondary traits in extreme phenotype sequencing
WenjianBI's Repositories
WenjianBI/SPACox
GWAS for survival analysis in large cohorts
WenjianBI/POLMM
Proportional Odds Logistic Mixed Model (POLMM) for ordinal categorical data analysis
WenjianBI/SPAGE
SaddlePoint Approximation implementation of GxE analysis
WenjianBI/STEPS
Functions to conduct genetic association analyses of secondary traits in extreme phenotype sequencing
WenjianBI/Bioinformatics
WenjianBI/coxphf
:exclamation: This is a read-only mirror of the CRAN R package repository. coxphf — Cox Regression with Firth's Penalized Likelihood. Homepage: http://cemsiis.meduniwien.ac.at/kb/wf/software/statistische-software/fccoxphf/
WenjianBI/EmpSPA
Empirical SaddlePoint Approximation implementation of GWAS for binary, time-to-event, or other traits
WenjianBI/grab.github.io
WenjianBI/math-as-code
a cheat-sheet for mathematical notation in code form
WenjianBI/pheweb
A tool to build multi-phenotype GWAS browsers
WenjianBI/pheweb-rg-pipeline
Genetic correlation calculation pipeline via summary statistics for PheWeb
WenjianBI/R_packages
WenjianBI/Rcpp
Summarize something about Rcpp
WenjianBI/RvED
Incorporating Effect Directions Boosts Statistical Power of Region-Based Association Tests
WenjianBI/SAIGE
WenjianBI/SAIGE-1
Development for SAIGE and SAIGE-GENE(+)
WenjianBI/seqminer
Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
WenjianBI/SKAT
:exclamation: This is a read-only mirror of the CRAN R package repository. SKAT — SNP-Set (Sequence) Kernel Association Test
WenjianBI/SKAT-1
Sequence kernel association test (SKAT)
WenjianBI/STEPS-simu
Examples to illustrate how to apply STEPS package
WenjianBI/survival
Survival package for R
WenjianBI/useful_code_for_genetic_analysis
Simple unix commands and more