Pinned Repositories
ansible-role-mutalyzer
Ansible role for Mutalyzer
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2017
AwesomeCollections
learn how to use github better
babun
Babun - a Windows shell you will love!
bamtools
C++ API & command-line toolkit for working with BAM data
beginner-html-site-scripted
A simple one page website created to help complete beginners learn HTML basics, which in this repo has also had some script added to help beginners learn JavaScript basics. The scripting is explained over the course of https://developer.mozilla.org/en-US/Learn/Getting_started_with_the_web/JavaScript_basics.
BigDataScript
BigDataScript: Scirpting language for big data
capp-seq-docker
SAVI
SAVI - statistical algorithm for variant identification
WinterLi1993's Repositories
WinterLi1993/capp-seq-docker
WinterLi1993/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2017
WinterLi1993/babun
Babun - a Windows shell you will love!
WinterLi1993/bamtools
C++ API & command-line toolkit for working with BAM data
WinterLi1993/BigDataScript
BigDataScript: Scirpting language for big data
WinterLi1993/bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
WinterLi1993/biopython
Official git repository for Biopython (converted from CVS)
WinterLi1993/cnvkit
Copy number variant detection from targeted DNA sequencing
WinterLi1993/Conpair
Concordance and contamination estimator for tumor–normal pairs
WinterLi1993/cpp
Learn C++
WinterLi1993/DeepSomatic
Classify somatic/germline mutations by deep neural networks
WinterLi1993/django
The Web framework for perfectionists with deadlines.
WinterLi1993/fks
前端技能汇总 Frontend Knowledge Structure
WinterLi1993/free-programming-books
:books: Freely available programming books
WinterLi1993/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
WinterLi1993/gatk-protected
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
WinterLi1993/hap.py
Haplotype VCF comparison tools
WinterLi1993/klib
A standalone and lightweight C library
WinterLi1993/Markdown
Markdown 基本语法。
WinterLi1993/markdown-js
A Markdown parser for javascript
WinterLi1993/MB-GATK-SGE
SGE scripts / pipeline for running GATK/VEP on a cluster
WinterLi1993/methods-dev
Repo for various methods development and evaluation work.
WinterLi1993/mutect2_snakemake
Run GAKT's MuTect2 using Snakemake
WinterLi1993/MutScan
Detect important mutations by scanning FastQ files directly
WinterLi1993/PyVCF
A Variant Call Format reader for Python.
WinterLi1993/scikit-image
Image Processing SciKit (Toolbox for SciPy)
WinterLi1993/seqtk
Toolkit for processing sequences in FASTA/Q formats
WinterLi1993/varscan
Variant calling and somatic mutation/CNV detection for next-generation sequencing data
WinterLi1993/vcf_parser
Simple vcf parser, based on PyVCF
WinterLi1993/XX-Net
a web proxy tool