Pinned Repositories
frame-interpolation
FILM: Frame Interpolation for Large Motion, In ECCV 2022.
HX_Motility_HierarchicalClustering
This is the final version of motility clustering package
HX_MSD_Diffusivity
This script was written by HX to compute MSD and Diffusivity from Manually tracked motility data (ImageJ, MetaMorph)
imbalanced-regression
[ICML 2021, Long Talk] Delving into Deep Imbalanced Regression
ingest-validation-tools
HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
microns-nda-access
Provides instructions and Docker configurations for accessing the microns_phase3_nda schema and/or an isolated database container.
MJH_Particle_Aggregation_Tracking
This script was initially written by MJH to track the aggregation of NK cells.
outpainting_srn
Wide-Context Semantic Image Extrapolation, CVPR2019
segment-anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
wsi_analysis
Wirtz Lab's Repositories
Wirtz-Lab/frame-interpolation
FILM: Frame Interpolation for Large Motion, In ECCV 2022.
Wirtz-Lab/HX_Motility_HierarchicalClustering
This is the final version of motility clustering package
Wirtz-Lab/HX_MSD_Diffusivity
This script was written by HX to compute MSD and Diffusivity from Manually tracked motility data (ImageJ, MetaMorph)
Wirtz-Lab/imbalanced-regression
[ICML 2021, Long Talk] Delving into Deep Imbalanced Regression
Wirtz-Lab/ingest-validation-tools
HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
Wirtz-Lab/Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
Wirtz-Lab/microns-nda-access
Provides instructions and Docker configurations for accessing the microns_phase3_nda schema and/or an isolated database container.
Wirtz-Lab/MJH_Particle_Aggregation_Tracking
This script was initially written by MJH to track the aggregation of NK cells.
Wirtz-Lab/outpainting_srn
Wide-Context Semantic Image Extrapolation, CVPR2019
Wirtz-Lab/Python_Tutorial
teaching python to anyone in Wirtz Lab
Wirtz-Lab/segment-anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
Wirtz-Lab/VAMPIRE
Wirtz-Lab/VAMPIRE_open
open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition
Wirtz-Lab/wsi_analysis
Wirtz-Lab/ashlar
ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
Wirtz-Lab/ECCV2022-RIFE
ECCV2022 - Real-Time Intermediate Flow Estimation for Video Frame Interpolation
Wirtz-Lab/hover_net
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
Wirtz-Lab/MinImagen
MinImagen: A minimal implementation of the Imagen text-to-image model
Wirtz-Lab/MinImagen-1
MinImagen: A minimal implementation of the Imagen text-to-image model
Wirtz-Lab/pytorch-CycleGAN-and-pix2pix
Image-to-Image Translation in PyTorch