Pinned Repositories
Athlon
Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing
DALIGNER
Find all significant local alignments between reads
Denovo
de novo assembly projects
graphmap
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html
maize_v4_TE_annotation
scripts and intermediate files used to annotate TEs in Jiao et al.
MashMap
A fast and approximate long read mapper
miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
smartdenovo
Ultra-fast de novo assembler using long noisy reads
wtdbg
A fuzzy Bruijn graph approach to long noisy reads assembly
WonderOmics's Repositories
WonderOmics/graphmap
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html
WonderOmics/MashMap
A fast and approximate long read mapper
WonderOmics/Athlon
Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing
WonderOmics/DALIGNER
Find all significant local alignments between reads
WonderOmics/Denovo
de novo assembly projects
WonderOmics/miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
WonderOmics/maize_v4_TE_annotation
scripts and intermediate files used to annotate TEs in Jiao et al.
WonderOmics/wtdbg
A fuzzy Bruijn graph approach to long noisy reads assembly
WonderOmics/smartdenovo
Ultra-fast de novo assembler using long noisy reads