Yanghaoyan2024

Yanghaoyan2024's Stars

• LKremer/showTree

  showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.

  Language:Python309

• hahnlab/cafe_tutorial

  Language:HTML148

• LKremer/CAFE_fig

  A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

  Language:Python5916

• hahnlab/CAFE5

  Version 5 of the CAFE phylogenetics software

  Language:C++10822

• hahnlab/CAFE

  Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.

  Language:C++10937

• wilkox/gggenes

  ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

  Language:R47749

• PacificBiosciences/trgt

  Tandem repeat genotyping and visualization from PacBio HiFi data

  Language:Rust938

• Immortal2333/Telomeres_and_Centromeres

  This is a method to find telomeres and centromeres in plants.

  346

• tolkit/telomeric-identifier

  Identify and find telomeres, or telomeric repeats in a genome.

  Language:Rust9911

• schneebergerlab/fixchr

  Language:Python121

• qiao-xin/DupGen_finder

  A pipeline used to identify different modes of duplicated gene pairs

  Language:C++8329

• kiranbandi/synvisio

  SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity detection toolkit.

  Language:JavaScript7713

• hewm2008/NGenomeSyn

  Any Way to Show Multi genomic Synteny

  Language:Perl14116

• schneebergerlab/plotsr

  Tool to plot synteny and structural rearrangements between genomes

  Language:Python26827

• schneebergerlab/syri

  Synteny and Rearrangement Identifier

  Language:Cython30536

• wyp1125/MCScanX

  MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!

  Language:CAP CDS20759

• tanghaibao/jcvi

  Python library to facilitate genome assembly, annotation, and comparative genomics

  Language:Python713185