Yasas1994
I am a PhD student with a passion for creating data-driven tools that will assist life scientists with data analysis. Currently working at @kaderali @MGXlab
University of GreifswaldGermany
Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
Clustering-significance-test
Permutation test for identification of statistically significant clusters in a phylogenetic tree
country_packing
download-and-reannotation-of-phage-genomes
A snakemake workflow for downloading and reannotating phage genomes
Jaeger
Jaeger is a quick and precise tool for detecting phages in sequence assemblies.
lib-rtf
Return time frequency based virus genotype clustering/detection program
MGnify-assembly-downloader
Downloads all assemblies available on MGnify
phage_contig_annotator
Annotates genes on putative phage contigs with protein orthologous groups using PHROGs
sequence_fragment_simulator
viroinf-hiddensee
Datasets for the ViroInf Hiddensee workshop
Yasas1994's Repositories
Yasas1994/Jaeger
Jaeger is a quick and precise tool for detecting phages in sequence assemblies.
Yasas1994/phage_contig_annotator
Annotates genes on putative phage contigs with protein orthologous groups using PHROGs
Yasas1994/MGnify-assembly-downloader
Downloads all assemblies available on MGnify
Yasas1994/lib-rtf
Return time frequency based virus genotype clustering/detection program
Yasas1994/bioconda-recipes
Conda recipes for the bioconda channel.
Yasas1994/Clustering-significance-test
Permutation test for identification of statistically significant clusters in a phylogenetic tree
Yasas1994/download-and-reannotation-of-phage-genomes
A snakemake workflow for downloading and reannotating phage genomes
Yasas1994/sequence_fragment_simulator
Yasas1994/viroinf-hiddensee
Datasets for the ViroInf Hiddensee workshop
Yasas1994/country_packing
Yasas1994/DeepLearningNoteBooks
Tutorials for different deep learning models
Yasas1994/ICTV-TaxonomyChallenge