Sesame germplasm phenotypic diversity analyses
Please refer to the following zenodo link for proper citation:
The present repository contained two folders corresponding to the data sets and the R codes.
The R scripts are organized as follows:
01. Data diagnosis and descriptive statistics
02. Boxplot representation of the quantitative data
03. Pie chart representation of the qualitative data
04. Diversity index calculation
05. Correlation between the phenotypic variables
06. Path coefficient analysis
07. Principal correspondence analysis and hierarchical clustering
08. Core collection inference
09. Geographic Information System (GIS) mapping
For reproducibility, please consider some changes in the working directories.
Acknowledgements
This study was carried out with the support of the Cooperative Research Program for National Agricultural Genome Program (Project No. PJ01347002), Rural Development Administration, South Korea.