ZacharyWang-007

ZacharyWang-007's Stars

• lucidrains/perceiver-pytorch

  Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch

  Language:Python1.1k3159134

• OmicsML/awesome-deep-learning-single-cell-papers

  71531592

• owkin/PyDESeq2

  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  Language:Python6131113970

• titipata/pubmed_parser

  :clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

  Language:Python60521105170

• vqdang/hover_net

  Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

  Language:Python54911260232

• vanvalenlab/deepcell-tf

  Deep Learning Library for Single Cell Analysis

  Language:Python43416274100

• junkunyuan/Awesome-Domain-Generalization

  Awesome things about domain generalization, including papers, code, etc.

  4045144

• TissueImageAnalytics/tiatoolbox

  Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

  Language:Python392715882

• mahmoodlab/PathomicFusion

  Fusing Histology and Genomics via Deep Learning - IEEE TMI

  Language:Jupyter Notebook287142484

• crazyhottommy/awesome_spatial_omics

  tools and notes for spatial omics

  25515150

• theislab/dca

  Deep count autoencoder for denoising scRNA-seq data

  Language:Python252116071

• gzcsudo/Awesome-Hypergraph-Network

  A curated list of Hypergraph Learning, Hypergraph Theory, Hypergraph Dataset and Hypergraph Tool.

  2226123

• hsd1503/DL-ECG-Review

  A Review of Deep Learning Methods on ECG Data

  21714044

• mahmoodlab/PORPOISE

  Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell

  Language:Jupyter Notebook19241437

• malllabiisc/HyperGCN

  NeurIPS 2019: HyperGCN: A New Method of Training Graph Convolutional Networks on Hypergraphs

  Language:Python1894532

• mahmoodlab/MCAT

  Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021

  Language:Jupyter Notebook18042237

• uvavision/Curriculum-Labeling

  [AAAI 2021] Curriculum Labeling: Revisiting Pseudo-Labeling for Semi-Supervised Learning

  Language:Python1362522

• Xiyue-Wang/RetCCL

  Language:Python97388

• SsGood/MMGL

  Multi-modal Graph learning for Disease Prediction (IEEE Trans. on Medical imaging, TMI2022)

  Language:Jupyter Notebook9331617

• med-air/HarmoFL

  [AAAI'22] HarmoFL: Harmonizing Local and Global Drifts in Federated Learning on Heterogeneous Medical Images

  Language:Python874515

• openmedlab/SAM-Med2D

  SAM-Med2D: Bridging the Gap between Natural Image Segmentation and Medical Image Segmentation

  Language:Jupyter Notebook63132

• AdalbertoCq/Histomorphological-Phenotype-Learning

  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Quesne J.*, Tsirigos A.*, and Yuan K.* Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unlabeled, unannotated pathology slides. 2024'

  Language:Python504614

• ZacharyWang-007/FED-Occluded-ReID

  This is the Pytorch implementation of Feature Erasing and Diffusion Network for Occluded Person Re-Identification (CVPR2022).

  Language:Python37267

• YohnGuan/NAGCN

  Language:Python26247

• Cassie07/Review_Molecular_profile_prediction_GNN

  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profile Prediction in Colon Cancer Histopathology: A Retrospective Multicentre Cohort Study"

  Language:Python25335

• ZacharyWang-007/G-HANet

  Language:Jupyter Notebook11110

• ZacharyWang-007/Surformer

  Language:Python8121

• ZacharyWang-007/MDMIL

  Against Tumor Heterogeneity: Multiplex-Detection-Based Multiple Instance Learning for Whole Slide Image Classification

  Language:Python7301

• ZJUFanLab/SpaTrio

  Language:Python7122

• bcli4d/qptiff

  Tools for qptiff files

  Language:Python4200