Zhen-Miao

Rfast

A collection of Rfast functions for data analysis. Note 1: The vast majority of the functions accept matrices only, not data.frames. Note 2: Do not have matrices or vectors with have missing data (i.e NAs). We do no check about them and C++ internally transforms them into zeros (0), so you may get wrong results. Note 3: In general, make sure you give the correct input, in order to get the correct output. We do no checks and this is one of the many reasons we are fast.

dev-kidney-snATAC

Codes used in the developmental kidney snATAC-seq data

DNAbert_p

kernel_PMA

An extension of the CRAN R package PMA — Penalized Multivariate Analysis. Homepage: https://github.com/bnaras/PMA Report bugs for this package: https://github.com/bnaras/PMA/issues

PACS

Probability Model of Accessible Chromatin of Single cells

PIC-snATAC

Paired Insertion Counting for snATAC-seq data

PICsnATAC

Paired Insertion Counting for snATAC-seq data

TACTICAL_ne

Tissue of ACTion scores for Investigating Complex trait-Associated Loci (modified -- no expression)

Zhen-Miao-academicpage.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

zhenmiao_home

Zhen-Miao/PICsnATAC

Paired Insertion Counting for snATAC-seq data

Zhen-Miao/PACS

Probability Model of Accessible Chromatin of Single cells

Zhen-Miao/PIC-snATAC

Paired Insertion Counting for snATAC-seq data

Zhen-Miao/dev-kidney-snATAC

Codes used in the developmental kidney snATAC-seq data

Zhen-Miao/DNAbert_p

Zhen-Miao/kernel_PMA

An extension of the CRAN R package PMA — Penalized Multivariate Analysis. Homepage: https://github.com/bnaras/PMA Report bugs for this package: https://github.com/bnaras/PMA/issues

Zhen-Miao/TACTICAL_ne

Tissue of ACTion scores for Investigating Complex trait-Associated Loci (modified -- no expression)

Zhen-Miao/Zhen-Miao-academicpage.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Zhen-Miao/zhenmiao_home