Zojka
Laboratory of Functional and Structural Genomics, CeNT, University of Warsaw and Faculty of Mathematics and Information Science, Warsaw University of Technology
Warsaw, Poland
Pinned Repositories
tad_compare
Compare different sets of TADs inferred from Hi-C data (or other 3C technique) using different methods.
juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
2020L-WizualizacjaDanych
adventofcode
bio-VCF
biopython + VCF support
CHiC
Arima Capture HiC pipeline (Arima-CHiC)
genome-blender
Scripts to create cartoons of 3D genomes
hic-data-analysis-bootcamp
Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
pyqt-simple-introduction
PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
Zojka's Repositories
Zojka/adventofcode
Zojka/2020L-WizualizacjaDanych
Zojka/bio-VCF
biopython + VCF support
Zojka/CHiC
Arima Capture HiC pipeline (Arima-CHiC)
Zojka/genome-blender
Scripts to create cartoons of 3D genomes
Zojka/hic-data-analysis-bootcamp
Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
Zojka/pyqt-simple-introduction
Zojka/PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
Zojka/Intro-to-ChIPseq
Intro to ChIPseq using HPC
Zojka/juice2topdom
Zojka/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Zojka/luigi_seq
Zojka/python-patterns
A collection of design patterns/idioms in Python
Zojka/scikit-learn
scikit-learn: machine learning in Python
Zojka/Sequence_Alignment_bio