Zuber lab

Vienna, Austria

Pinned Repositories

Containers
Repository of Makefiles for Docker containers
Language:Dockerfile0 3 01
crispr-mageck-nf
Analyze CRISPR and shRNA functional genetic screening data
Language:Nextflow7 3 25
crispr-nf
Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)
Language:Nextflow2 3 42
crispr-process-nf
Process CRISPR and shRNA functional genetic screening data
Language:Nextflow3 3 01
crisprepo-shiny
Shiny frontend for browsing screening data
Language:R1 3 00
dual-crispr-process-nf
Process dual-sgRNA CRISPR functional genetic screening data.
Language:Nextflow0 2 00
guidemapper-nf
Annotate CRISPR and shRNA screening libraries
Language:R1 3 00
mageck-nf
Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)
Language:R3 3 00
palantir-shiny
Shiny frontend for browsing and gene expression and screening data
Language:R0 3 10
vbcf-nf
Retrieve Files from VBCF Sequencing Facility
Language:Nextflow1 3 00

ZuberLab/crispr-mageck-nf
Analyze CRISPR and shRNA functional genetic screening data
Language:Nextflow7 3 25
ZuberLab/crispr-process-nf
Process CRISPR and shRNA functional genetic screening data
Language:Nextflow3 3 01
ZuberLab/mageck-nf
Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)
Language:R3 3 00
ZuberLab/crispr-nf
Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)
Language:Nextflow2 3 42
ZuberLab/crisprepo-shiny
Shiny frontend for browsing screening data
Language:R1 3 00
ZuberLab/guidemapper-nf
Annotate CRISPR and shRNA screening libraries
Language:R1 3 00
ZuberLab/vbcf-nf
Retrieve Files from VBCF Sequencing Facility
Language:Nextflow1 3 00
ZuberLab/Containers
Repository of Makefiles for Docker containers
Language:Dockerfile0 3 01
ZuberLab/dual-crispr-process-nf
Process dual-sgRNA CRISPR functional genetic screening data.
Language:Nextflow0 2 00
ZuberLab/palantir-shiny
Shiny frontend for browsing and gene expression and screening data
Language:R0 3 10
ZuberLab/sra-nf
Download Raw Reads from SRA Archive
Language:Nextflow0 3 00