aCLImatise/BiocondaAutomation

Issues

• Split reanalyse and aCLImatise new into separate jobs

  #24 opened 4 years ago by multimeric
  1

• Add Janis converter

  #22 opened 4 years ago by multimeric
  1

• Add docker images

  #21 opened 4 years ago by multimeric
  1

• Stop using biocontainers.pro to list containers

  #20 opened 4 years ago by multimeric
  0

• drop r

  #6 opened 4 years ago by bernt-matthias
  0

• Fix the elusive memory leaks

  #1 opened 4 years ago by multimeric
  0

• use singularity containers for speedup?

  #5 opened 4 years ago by bernt-matthias
  6

• Explicitly handle exceptions in processes, and kill containers

  #14 opened 4 years ago by multimeric
  0

• Ignore `bin/` files that aren't in the PATH

  #15 opened 4 years ago by multimeric
  0

• Better logging

  #13 opened 4 years ago by multimeric
  0

• Include file extension, again

  #3 opened 4 years ago by multimeric
  0

• skip post-link.sh and pre-unlink.sh scripts

  #8 opened 4 years ago by bernt-matthias
  2

• conda dependency missing

  #4 opened 4 years ago by bernt-matthias
  2

• Fix executables that can't be run directly, and need an interpreter. e.g. `oe.R`

  #2 opened 5 years ago by multimeric
  0