/BioChem-Err-DNA

Primary LanguageJupyter NotebookMIT LicenseMIT

BioChem-Err-DNA

A neural network tried to model the errors that happened in biochemical manipulation of DNA molecules. The data was acquired from a DNA storage research, see

@article{gao2020lowbias,
author = {Gao, Yanmin and Chen, Xin and Qiao, Hongyan and Ke, Yonggang and Qi, Hao},
title = "{Low-bias manipulation of DNA oligo pool for robust data storage}",
journal = {ACS Synthetic Biology},
volume = {9},
number = {12},
pages = {3344-3352},
year = {2020},
doi = {10.1021/acssynbio.0c00419},
note ={PMID: 33185422},
}

If this code is helpful to you, maybe you wanna take a look at

@article{9453168,
author={Guo, Alan J.X. and Qi, Hao},
journal={IEEE/ACM Transactions on Computational Biology and Bioinformatics}, 
title={Using Artificial Neural Networks to Model Errors in Biochemical Manipulation of DNA Molecules}, 
year={2021},
volume={},
number={},
pages={1-1},
doi={10.1109/TCBB.2021.3088525}
}