Pinned Repositories
cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
DeepCAT
Deep Learning Method to Identify Cancer Associated TCRs - modified to output score for each CDR3
gcp-vscode-server
Run vscode server on GCP through iap. Start instance when in ssh connection, and stop if inactive.
intro-to-deepcell
An introduction to deepcell and deep learning
mcmicro-scanpy
An MCMICRO module implementation of scanpy for clustering cells. modify to output adata scanpy objects
python-bioimage-analysis-tutorial
The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!
Spatial-lit-review
Running notes of publication with spatially-resolved data. Organized by topics and use cases.
deepcell-applications
Run DeepCell Applications
aandytu's Repositories
aandytu/cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
aandytu/DeepCAT
Deep Learning Method to Identify Cancer Associated TCRs - modified to output score for each CDR3
aandytu/gcp-vscode-server
Run vscode server on GCP through iap. Start instance when in ssh connection, and stop if inactive.
aandytu/intro-to-deepcell
An introduction to deepcell and deep learning
aandytu/mcmicro-scanpy
An MCMICRO module implementation of scanpy for clustering cells. modify to output adata scanpy objects
aandytu/python-bioimage-analysis-tutorial
The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!
aandytu/Spatial-lit-review
Running notes of publication with spatially-resolved data. Organized by topics and use cases.