Pinned Repositories
Cooperative-Binding-Modeling
R code to jointly estimate using non-linear regression transcription-factor DNA binding affinities and cooperative binding
Genome-assembly-and-pop-gen-stuff
MNM_SelectionTests
Tests of selection incorporating multinucleotide mutations
Multinucleotide-mutations-modeling
Modeling complex mutations using a phylogenetic model, and testing for natural selection
PHP_MySQL_GeneBlasts
A PHP program to blast genes in different MySQL databases, and test for orthologs using reciprocal blast
SACNAS_DataScience
Data science technical interview event. November 3, 2018.
SACNAS_fun
This repo contains some simple and fun examples for our SACNAS event!
ShellScripting
A useful bash pipeline to align mate pairs
Tempus_bioinf_challenge
nanoGPT
The simplest, fastest repository for training/finetuning medium-sized GPTs.
aartivnkt's Repositories
aartivnkt/MNM_SelectionTests
Tests of selection incorporating multinucleotide mutations
aartivnkt/SACNAS_fun
This repo contains some simple and fun examples for our SACNAS event!
aartivnkt/Cooperative-Binding-Modeling
R code to jointly estimate using non-linear regression transcription-factor DNA binding affinities and cooperative binding
aartivnkt/Genome-assembly-and-pop-gen-stuff
aartivnkt/Multinucleotide-mutations-modeling
Modeling complex mutations using a phylogenetic model, and testing for natural selection
aartivnkt/PHP_MySQL_GeneBlasts
A PHP program to blast genes in different MySQL databases, and test for orthologs using reciprocal blast
aartivnkt/SACNAS_DataScience
Data science technical interview event. November 3, 2018.
aartivnkt/ShellScripting
A useful bash pipeline to align mate pairs
aartivnkt/Tempus_bioinf_challenge
aartivnkt/intro-to-python
Materials for Intro to Python class