aawdeh

aawdeh

CellBender

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

ChromDragoNN

Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts"

feb_9_practice_2

Macosko-Pipelines

MACS

MACS -- Model-based Analysis of ChIP-Seq

Open-Omics-Acceleration-Framework

Intel lab's open sourced data science framework for accelerating digital biology

PANOPLY

Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)

RSEM_ExonLevel

Use BAM file output by RSEM to generate exon level quantifications.

SigTFB

aawdeh/SigTFB

aawdeh/aawdeh

aawdeh/CellBender

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

aawdeh/ChromDragoNN

Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts"

aawdeh/feb_9_practice_2

aawdeh/Macosko-Pipelines

aawdeh/MACS

MACS -- Model-based Analysis of ChIP-Seq

aawdeh/Open-Omics-Acceleration-Framework

Intel lab's open sourced data science framework for accelerating digital biology

aawdeh/PANOPLY

Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)

aawdeh/RSEM_ExonLevel

Use BAM file output by RSEM to generate exon level quantifications.

aawdeh/WACS

aawdeh/warp-tools

This repository contains all containers that WARP uses.