Pinned Repositories
4mCBERT
4mCBERT
ACPNet
AI-Drug-Discovery-Design
AI drug design
AI4ACEIP
AMPFinder
DNA_features
Feature extraction methods of DNA
HemoDL
HemoDL codes
IPPF-FE
LncMirNet
ncrna-deep
Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
abcair's Repositories
abcair/LncMirNet
abcair/4mCBERT
4mCBERT
abcair/AMPFinder
abcair/HemoDL
HemoDL codes
abcair/IPPF-FE
abcair/AI-Drug-Discovery-Design
AI drug design
abcair/AI4ACEIP
abcair/AIPBoost
abcair/alphafold_finetune
Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
abcair/ASPIRER
abcair/annotated_deep_learning_paper_implementations
🧑🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
abcair/Deep-B3
A multi-model framework for blood-brain barrier permeability discovery
abcair/DeepDTAF
a deep learning architecture for protein-ligand binding affinity prediction
abcair/DeepLncPro
DeepLncPro is able to identify the promoters of long non-coding RNA in Human and Mouse.
abcair/DeepNeo
identification of immunogenic neoepitopes
abcair/DNAPerceiver
abcair/EGFAFS
EGFAFS
abcair/FunClip
Open-source, accurate and easy-to-use video speech recognition & clipping tool, LLM based AI clipping intergrated.
abcair/GCNCMI
CircRNA-miRNA interaction Prediction Based on Graph Neural Network
abcair/keras-io
Keras documentation, hosted live at keras.io
abcair/KNIndex
A comprehensive database of k-nucleotide physicochemical property values.
abcair/LLM4THP
abcair/LncReader
LncReader: identification of dual functional long non-coding RNAs using multi-head self-attention mechanism
abcair/PST-PRNA
abcair/PyFingerprint
Python tool for generate fingerprints of a molecule
abcair/QCMTP
abcair/RBP-TSTL
abcair/RLBind
a deep learning architecture for RNA-ligand binding sites prediction
abcair/SiameseCPP
abcair/Time-Series-Library
A Library for Advanced Deep Time Series Models.