Pinned Repositories
arvados-pipelines
asmukk
Implementation of Ukkonen's approximate string matching algorithm
autoio
Golang io functions that provide standard scanner interfaces for compressed files.
cgf
Compact Genome Format
cglf
Compact Genome Library Format
ClinVarReport
ClinVar report generation for Arvados
ClinVarReportHTML
Arvados crunch job to generate HTML ClinVar report
dlug
Dlugosz based variable length integer encoding scheme
scratch
Sandbox
untap
abeconnelly's Repositories
abeconnelly/untap
abeconnelly/asmukk
Implementation of Ukkonen's approximate string matching algorithm
abeconnelly/dlug
Dlugosz based variable length integer encoding scheme
abeconnelly/scratch
Sandbox
abeconnelly/cgf
Compact Genome Format
abeconnelly/cglf
Compact Genome Library Format
abeconnelly/ClinVarReport
ClinVar report generation for Arvados
abeconnelly/ClinVarReportHTML
Arvados crunch job to generate HTML ClinVar report
abeconnelly/Concordance
abeconnelly/documentation
Misc. documents
abeconnelly/FAQ
prototype FAQ page for PGP
abeconnelly/GETEvidenceReport
Arvados job for producing a GET-Evidence report
abeconnelly/GETEvidenceReportHTML
Arvados job to produce an HTML report from the GET-Evidence JSON report
abeconnelly/GETEvidenceReportRefresh
Arvados job to refresh the GET-Evidence report
abeconnelly/glfd
Tile library server
abeconnelly/hgvm-lightning-graph
Graph representation of Lightning for the HGVM Pilot
abeconnelly/l7g
abeconnelly/l7g-1
abeconnelly/l7g-p7e-untap
abeconnelly/l7g-v5t-clinvar
abeconnelly/lantern
Population query server
abeconnelly/lci
Coordinator for the different Lightning sevices
abeconnelly/memz
abeconnelly/pasta
abeconnelly/server
A reference implementation of the APIs defined in the schemas repository.
abeconnelly/simplestream
abeconnelly/sloppyjson
abeconnelly/tranche
Expose range of bytes from an underlying file through a FUSE mount point
abeconnelly/vcf2clinvar
Match a personal genome VCF datafile to ClinVar
abeconnelly/vg
tools for working with variation graphs