Pinned Repositories
ansible-singularity
https://galaxy.ansible.com/lecorguille/singularity
drap
Fork of DRAP (http://www.sigenae.org/drap) modified for ABiMS cluster
galaxy-blastprivate
GGA_Cloud
These Ansible recipes allow the deployment of a Virtual Machine in an OpenStack cloud via the Terraform software, the installation of the GGA environment and its dependencies, as well as loading data into the Galaxy library.
tools-abims
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
training-material
A collection of training material from offered Galaxy courses
trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
tripal_linkout
The Linkout module provides a web service for generation of external links
WinstonCleaner
ABiMS - Station Biologique de Roscoff - France - CNRS/SU's Repositories
abims-sbr/ansible-singularity
https://galaxy.ansible.com/lecorguille/singularity
abims-sbr/D4_marine_eukaryote_genomics_portal
EOSC-Life Demonstrator 4
abims-sbr/drap
Fork of DRAP (http://www.sigenae.org/drap) modified for ABiMS cluster
abims-sbr/GGA_Cloud
These Ansible recipes allow the deployment of a Virtual Machine in an OpenStack cloud via the Terraform software, the installation of the GGA environment and its dependencies, as well as loading data into the Galaxy library.
abims-sbr/ansible-sequenceserver
https://galaxy.ansible.com/abims_sbr/sequenceserver: an Ansible Role that installs SequenceServer on Linux and deploys one NCBI BLAST+ server for each BLAST database, reverse-proxied by NGINX, submitting jobs on a SLURM HPC cluster
abims-sbr/aozan
An automated post sequencing data processing pipeline for Illumina HiSeq
abims-sbr/bioanalyse_protocoles
A list of bio-analyse protocoles
abims-sbr/configs
Config files used to define parameters specific to compute environments at different Institutions
abims-sbr/D4_marine_eukaryote_genomics_portal_docker
Marine Eukaryote Genomics Portal Docker
abims-sbr/galaxy-blastprivate
abims-sbr/galaxy-blastvisu
Visualisation for Blast XML outputs under Galaxy
abims-sbr/MCSC_Decontamination
Scripts and documentations on the MCSC decontamination method
abims-sbr/tools-abims
abims-sbr/tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
abims-sbr/training-material
A collection of training material from offered Galaxy courses
abims-sbr/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
abims-sbr/tripal_linkout
The Linkout module provides a web service for generation of external links
abims-sbr/WinstonCleaner
abims-sbr/adaptsearch
A pipeline for the search of adaptive mutations and positively selected genes from RNASeq orthologs
abims-sbr/ansible-gitlab-runner
Ansible role to install gitlab-runner (Major update 1.2.0 please verify your jobs!)
abims-sbr/bioconda-recipes
Conda recipes for the bioconda channel.
abims-sbr/biomaj-data
Sample community db properties and postprocesses
abims-sbr/docker_slurm_exec
abims-sbr/goslim-analysis
abims-sbr/HoloVir
HoloVir is a robust and flexible data analysis pipeline that provides an optimised and validated workflow for taxonomic and functional characterisation of viral metagenomes
abims-sbr/shiny_transcriptomic_aggregator_ectocarpus