Pinned Repositories
acq4
Main repository for ACQ4 development
analysis-tools
Code for analyzing data saved by the Open Ephys GUI
ara_tools
Analysis of mouse brain STP data with respect to the Allen Reference Atlas
bg-gitbook
Mirror of the brainglobe GitBook page
bonsai-rx-docs
unofficial documentation for bonsai-rx
BonVision
BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of Behavioural Neuroscience in collaboration with NeuroGEARS.
brainreg
Automated 3D brain registration with support for multiple species and atlases.
brainregister
Python package for elastix-based registration of tissues to atlases; with mouse brain registration to the Allen CCFv3 built-in.
cellfinder
Automated 3D cell detection and registration of whole-brain images
cellfinder-core
Standalone cellfinder cell detection algorithm
ablot's Repositories
ablot/acq4
Main repository for ACQ4 development
ablot/ara_tools
Analysis of mouse brain STP data with respect to the Allen Reference Atlas
ablot/bg-gitbook
Mirror of the brainglobe GitBook page
ablot/bonsai-rx-docs
unofficial documentation for bonsai-rx
ablot/BonVision
BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of Behavioural Neuroscience in collaboration with NeuroGEARS.
ablot/brainreg
Automated 3D brain registration with support for multiple species and atlases.
ablot/brainregister
Python package for elastix-based registration of tissues to atlases; with mouse brain registration to the Allen CCFv3 built-in.
ablot/cellfinder
Automated 3D cell detection and registration of whole-brain images
ablot/cellfinder-core
Standalone cellfinder cell detection algorithm
ablot/cellfinder-documentation
Documentation for the cellfinder project
ablot/documentation
Documentation source for ACQ4
ablot/examples
Example workflows for the BonVision closed-loop visual environment generator
ablot/hello_package
Hello world package
ablot/ibllib
IBL core shared libraries
ablot/KiloSort
GPU code for spike sorting
ablot/lasagna
3-D imaging visualisation through slicing
ablot/masiv
Matlab Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data
ablot/my_first_repo
Try to use git and run a python script
ablot/neuro
Visualisation and analysis of brain imaging data
ablot/onix-docs
Documentation for ONIX, the next-generation Open Ephys Acquisition System
ablot/phy-contrib
Plugins for phy
ablot/Pinceau
Model for the ephaptic inhibition paper
ablot/plugin-GUI
Open Ephys GUI with plugin architecture
ablot/programming_python3
ablot/read-roi
Read ROI files .zip or .roi generated with ImageJ.
ablot/spikes
cortex lab code for electrophysiology
ablot/StitchIt
Stitching of large tiled datasets
ablot/SuperElastix-Documentation
SuperElastix Documentation
ablot/Tetroplater
An open-source circuit for microwire tetrode gold plating
ablot/TIFFStack
Load TIFF files into matlab fast, with lazy loading