Pinned Repositories
docker-apollo-report
A docker image to generate regular annotation reports from an Apollo instance
docker-nginx-ldap
A docker image for Nginx including the LDAP authentification module
docker-tripal-demo
Tripal Demo using Docker
tripal_rest_api
A drupal module exposing a REST API to interact with Tripal 2.x.
python-apollo
Python library for talking to Apollo API
python-chado
A Python library for interacting with Chado database
galaxy
Data intensive science for everyone.
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
biomaj2galaxy
BioMAJ post processes to manipulate Galaxy tool data tables
Apollo
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
abretaud's Repositories
abretaud/docker-apollo-report
A docker image to generate regular annotation reports from an Apollo instance
abretaud/ansible-galaxy
An Ansible role for managing a Galaxy server
abretaud/ansible-tiaas2
Ansible role for deploying TIaaS2
abretaud/bcbb
Incubator for useful bioinformatics code, primarily in Python and R
abretaud/bioblend
A python library for interacting with CloudMan and Galaxy API
abretaud/bioconda-recipes
Conda recipes for the bioconda channel.
abretaud/configs
Config files used to define parameters specific to compute environments at different Institutions.
abretaud/docker-bbric-archive
abretaud/docker-gnb
A docker image for genenotebook
abretaud/docker-sf-blast
Docker image for a simple blast form using Symfony framework
abretaud/EBAII
Supports de cours de l'Ecole de Bioinformatique Aviesan - IFB - Inserm "Initiation au traitement des données de génomique obtenues par séquençage à haut débit"
abretaud/funannotate
Eukaryotic Genome Annotation Pipeline
abretaud/galaxy
Data intensive biology for everyone.
abretaud/galaxy-hub
Galaxy Community Hub
abretaud/galaxy_tool_metadata_extractor
Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)
abretaud/genenotebook
A collaborative notebook for genes and genomes
abretaud/gravity
Galaxy process management and system administration tools
abretaud/gxadmin
Handy command line utility for Galaxy administrators :rocket:
abretaud/infrastructure-playbook
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
abretaud/interproscan
abretaud/pulsar-infrastructure
abretaud/pulsar-network-docs
Documentation for the Galaxy Pulsar network
abretaud/statistics
Public Gallantries statistics
abretaud/tiaas2
Reusable Training Infrastructure as a Service
abretaud/tools-au
A home for local tool wrappers on Galaxy Australia and a testing ground for changes to existing wrappers
abretaud/tools-iuc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission
abretaud/training-material
A collection of training material from offered Galaxy courses
abretaud/unicornherder
Unicorn Herder: manage daemonized (g)unicorns
abretaud/usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
abretaud/website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)