Pinned Repositories
2022-biohackathon-bhxiv
BioHackrXiv for 2022 BioHackathon Europe Project 6 (Genome Assembly, Annotation, and Evaluation)
abueg
abueg.github.io
BandageNG
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
beautiful-jekyll
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
bioconda-recipes
Conda recipes for the bioconda channel.
biohackathon-projects-2022
Project code for BioHackathon Europe 2022.
deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
EMBO-24-genome-sequencing
posters
Check out my previous poster presentations here.
abueg's Repositories
abueg/BandageNG
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
abueg/2022-biohackathon-bhxiv
BioHackrXiv for 2022 BioHackathon Europe Project 6 (Genome Assembly, Annotation, and Evaluation)
abueg/abueg
abueg/abueg.github.io
abueg/bioconda-recipes
Conda recipes for the bioconda channel.
abueg/biohackathon-projects-2022
Project code for BioHackathon Europe 2022.
abueg/deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
abueg/EMBO-24-genome-sequencing
abueg/gfastats
A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.
abueg/posters
Check out my previous poster presentations here.
abueg/FASTK
A fast K-mer counter for high-fidelity shotgun datasets
abueg/galaxy
Data intensive science for everyone.
abueg/galaxy-hub
Galaxy Community Hub
abueg/galaxy_ans_22.05
ansible playbook + installation/upgrade notes for the VGL galaxy instance, non-root install on RHEL 7.8
abueg/galaxytools
:microscope::books: Galaxy Tool wrappers
abueg/genomeark-metadata
abueg/genomeark.github.io
https://genomeark.github.io/
abueg/GenomeAssembly
abueg/hprc-tutorials
abueg/infrastructure-playbook
Ansible playbook for managing UseGalaxy.eu infrastructure.
abueg/iwc
Intergalactic Workflow Commission
abueg/long-read-assembly
Long-read assembly workshop
abueg/misc
miscellanea
abueg/miscellanea
pseudorandom things
abueg/MitoHiFi
Find, circularise and annotate mitogenome from PacBio assemblies
abueg/oldgithubpages
abueg/sorting-hat
UseGalaxy's very magical job sorting system :sparkles:
abueg/tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
abueg/training-material
A collection of Galaxy-related training material
abueg/vgp-assembly
VGP repository for the genome assembly working group