adcosta17

PhD Student, Simpson Lab. OICR, UofT Dept of CS

Pinned Repositories

abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Language:C0 0 00
BreakPointAssembly
A tool to quickly assembly SV breakpoints
Language:Python0 1 10
BubbleDetectionLR
Bubble Detection in Long Read assembly graphs
Language:C++3 1 00
Retrotransposon-insert-detection
Language:Python0 2 00
Retrotransposon-insert-validation
Language:Python0 1 00
somrit
Somatic Retrotransposon Insertion Toolkit
Language:Python7 1 01
somrit-test
Evaluation and plotting scripts for somrit publication
Language:Python0 1 00
somvarg
Somatic Variants from Graphs
Language:Python3 1 00
somvarg-test
Language:Python0 1 00
C4M-UofT.github.io
Language:Jupyter Notebook3 8 53

adcosta17's Repositories

adcosta17/somrit
Somatic Retrotransposon Insertion Toolkit
Language:Python7 1 01
adcosta17/BubbleDetectionLR
Bubble Detection in Long Read assembly graphs
Language:C++3 1 00
adcosta17/somvarg
Somatic Variants from Graphs
Language:Python3 1 00
adcosta17/abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Language:C0 0 00
adcosta17/BreakPointAssembly
A tool to quickly assembly SV breakpoints
Language:Python0 1 10
adcosta17/Retrotransposon-insert-detection
Language:Python0 2 00
adcosta17/Retrotransposon-insert-validation
Language:Python0 1 00
adcosta17/somrit-test
Evaluation and plotting scripts for somrit publication
Language:Python0 1 00
adcosta17/somvarg-test
Language:Python0 1 00