This repository describes the anlaysis performed in the paper Mann et al. Heterogeneous lineage-specific arginine deiminase expression within dental microbiome species. Microbiology Spectrum (2024)
This repository assumes that you are running in a Unix environment (e.g., Mac OSX or Linux) and you have conda installed.
To get this repository:
- Install and set up anaconda or miniconda as described as the bioconda documentation, including setting up channels.
- Clone this repository to your machine
git clone https://github.com/aemann01/ads_plaque.git && cd ads_plaqueTo activate the conda environment
conda env create environment.yml
conda activate 2022-ADS_plaqueTo deactivate the environment
conda deactivate 2022-ADS_plaque