This repository describes analyses performed for Vonaesch et al. 2023
This repository assumes you are running in a Unix environment (e.g., Mac OSX or Linux) and you have conda installed.
To get this repository:
- Install and set up anaconda or miniconda as described at the bioconda documentation
- Clone this repository to your machine and change into the directory with
git clone https://github.com/aemann01/afribiota.git- Next create the environment
conda env create environment.yml- To activate the environment
conda activate afribiota- To deactivate
conda deactivate