This repository details mock community simulation analyses performed in Austin et al. 2024. Metagenomic and paleopathological analyses of a historic documented collection expore ancient dental calculus as a diagnostic tool. Scientific Reports
This repository assumes you are running in a Unix environment (e.g., Mac OSX or Linux) and you have conda installed.
To get this repository:
git clone https://github.com/aemann01/terry_tb_sim.git && cd terry_tb_sim
Then create and load the conda environment
conda env create -f environment.yml
conda activate terry_tb_sim
To deactivate the environment
conda deactivate