/terry_tb_sim

Simulation analyses for Austin et al. /////

terry_tb_sim

This repository details mock community simulation analyses performed in Austin et al. 2024. Metagenomic and paleopathological analyses of a historic documented collection expore ancient dental calculus as a diagnostic tool. Scientific Reports

DOI

workflow

Setup

This repository assumes you are running in a Unix environment (e.g., Mac OSX or Linux) and you have conda installed.

To get this repository:

git clone https://github.com/aemann01/terry_tb_sim.git && cd terry_tb_sim

Then create and load the conda environment

conda env create -f environment.yml
conda activate terry_tb_sim

To deactivate the environment

conda deactivate