aertslab/cisTopic

Question about createcisTopicObject

kridsadakorn opened this issue · 1 comments

Hi, I would like to ask something about createcisTopicObject

count.matrix Count matrix containing cells as rows and regions as columns. The row names must be the coordinates in position format (e.g. chr1:110-610).

I wonder whether regions are as columns or rows?
I also wonder whether there is any bug in the code or just the wrong description?

Thank you

Hi there!

It's a bug in the description, rows should be regions. I will update it shortly.

Thanks for the report!

C