Issues
- 0
Missing resource cleanup in runWarpLDAModels
#83 opened by villadswin - 1
sha256sum download failed
#81 opened by Dalhte - 3
- 2
- 0
Loading Multiome data
#80 opened by sylestiel - 1
- 1
cisTopicObject <- selectModel(cisTopicObject) Error in .Call("rs_createGD") : C symbol name "rs_createGD" not in load table
#75 opened by yuxuanChen777 - 2
Downloading .feather file
#41 opened by jf292 - 1
Running Cistopic
#78 opened by Sayyam-Shah - 1
add cisTopic output to Seurat object?
#77 opened by klgoss - 0
- 2
Installation issue
#69 opened by andrewjkwok - 3
Column 4 ['rep..TF_lowConf...length.peaks..'] of item 2 is missing in item 1.
#56 opened by sylestiel - 1
Ununsed Arguement error in cisTopic/TcisTarget
#74 opened by AAA-3 - 2
How can I run cisTopic in R 4.0
#73 opened by Paul-YPH - 1
tSNE Clustering Thresholds
#71 opened by AAA-3 - 1
LDA run with Python and LogLikelihhod
#72 opened by fvalle1 - 3
- 3
- 1
annotateRegions with own dataset
#66 opened by sinkahak - 1
possibility to use BAM files from bulk ChIP
#65 opened by abedkurdi - 3
installation issue with ubuntu 20.04
#64 opened by vjbaskar - 1
maximal median size of population peaks
#62 opened by robinweide - 1
cistopic object to archR
#61 opened by ytang0831 - 2
- 2
The function runModels is missing
#59 opened by kridsadakorn - 1
subset a list of cells
#52 opened by hejing3283 - 2
getBigwigFiles functions error
#51 opened by ytang0831 - 2
Installation Trouble from cisTopic/R/RunModels.R
#46 opened by Toseph - 5
- 4
Trouble with installation
#42 opened by mvinyard - 1
Plotting cluster info signaturesHeatmap
#37 opened by ccruizm - 5
error in cisTopic(logLikelihoodByIter)
#35 opened by Sububioinfo - 1
input from fragments.tsv.gz?
#68 opened by JBreunig - 1
Tutorial Dataset files
#70 opened by AAA-3 - 1
Question about createcisTopicObject
#63 opened by kridsadakorn - 2
Is aggregation of dataset required for cisTopic
#57 opened by sylestiel - 2
- 2
Error in metadataFeather(path)
#55 opened by sylestiel - 0
How to obtain Signatures for our purposes
#54 opened by sylestiel - 4
Integration using Harmony as described in Drosophila eye-antennal disc preprint
#53 opened by liaojinyue - 3
cellTopicHeatmap - annotations
#45 opened by cmuus - 5
The choice of the bed file
#50 opened by ytang0831 - 0
- 2
How to load multiple 10X runs to cisTopic?
#39 opened by cartal - 5
- 2
Undefined functions
#43 opened by wkopp - 4
- 2
Export the topic-signature matrix
#36 opened by arutik - 6
Comparing untreated vs treated cells
#33 opened by ccruizm