Pinned Repositories
AAA-3
Config files for my GitHub profile.
pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
VoxHunt
VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps
rstudio
RStudio is an integrated development environment (IDE) for R
sctransform
R package for modeling single cell UMI expression data using regularized negative binomial regression
seurat
R toolkit for single cell genomics
signac
R toolkit for the analysis of single-cell chromatin data
scrublet
Detect doublets in single-cell RNA-seq data
scvelo
RNA Velocity generalized through dynamical modeling
Trimmomatic
AAA-3's Repositories
AAA-3/AAA-3
Config files for my GitHub profile.