affairyy

affairyy's Stars

• maxsonBraunLab/cutTag-pipeline

  Pipeline for Cut&Tag analysis

  Language:R187

• zhq921/cfWGBS-bioinfo-pip

  A comprehensive and rigid computational framework to identify reliable cfDNA methylation biomarkers from cfWGBS data

  Language:Python5

• Pitithat-pu/cfdnakit

  R Package for analyzing cell-free DNA for fragment length and copy-number alteration

  Language:R72

• kircherlab/cfDNA

  cfDNA analysis workflow

  Language:Python216

• MykMalev/EM-Seq_Bioinformatics

  Language:Shell1

• nebiolabs/EM-seq

  Tools and Data related to Enzymatic Methylation Sequencing

  Language:Nextflow165

• semenko/serpent-methylation-pipeline

  An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.

  Language:Python93

• dpryan79/MethylDackel

  A (mostly) universal methylation extractor for BS-seq experiments.

  Language:C16042

• oicr-gsi/emSeqQc

  Runs bwa-meth followed by bamqc and methyldackel

  Language:WDL2