AFIDs

anatomical fiducials project

https://github.com/afids

Pinned Repositories

afids-analysis
analysis for the anatomical fiducials manuscript
Language:Jupyter Notebook0 2 01
afids-clinical
Language:HTML0 0 00
afids-CNN
Automatic localization and identification of salient brain landmarks
Language:Python1 3 93
afids-data
manual curated brain anatomical landmark data on common neuroimaging datasets
Language:HTML2 2 00
afids-dbs
Data, code, and analysis for characterizing localization and registration errors during DBS using AFIDs
Language:MATLAB0 1 00
afids-macaca
anatomical fiducials protocol adapted for macaques
Language:Jupyter Notebook6 3 73
afids-protocol
https://afids.github.io/afids-protocol/
Language:HTML1 4 92
afids-protocol-old
Language:CSS2 2 00
afids-protocol-original
anatomical fiducial placement protocol
1 4 12
afids-validator
Validator for the anatomical fiducial placement protocol
Language:Python2 5 714

AFIDs's Repositories

afids/afids-macaca
anatomical fiducials protocol adapted for macaques
Language:Jupyter Notebook6 3 73
afids/afids-data
manual curated brain anatomical landmark data on common neuroimaging datasets
Language:HTML2 2 00
afids/afids-protocol-old
Language:CSS2 2 00
afids/afids-validator
Validator for the anatomical fiducial placement protocol
Language:Python2 5 714
afids/afids-CNN
Automatic localization and identification of salient brain landmarks
Language:Python1 3 93
afids/afids-protocol
https://afids.github.io/afids-protocol/
Language:HTML1 4 92
afids/afids-protocol-original
anatomical fiducial placement protocol
1 4 12
afids/afids-utils
Common utility functions for working with AFIDs data / workflows
Language:Python1 0 203
afids/afids-analysis
analysis for the anatomical fiducials manuscript
Language:Jupyter Notebook0 2 01
afids/afids-auto
automatic anatomical fiducial placement
Language:Python0 4 91
afids/afids-clinical
Language:HTML0 0 00
afids/afids-dbs
Data, code, and analysis for characterizing localization and registration errors during DBS using AFIDs
Language:MATLAB0 1 00
afids/afids-macaca-ohbm2021
AFIDs: a standardized framework for evaluating anatomical correspondence between primate brains (Poster OHBM 2021)
Language:HTML0 4 01
afids/tpl-fsaverage
0 2 00
afids/tpl-MNI152NLin2009bSym
0 0 00
afids/tpl-OASIS30ANTs
OASIS template, created by ANTs Consortium (@ANTsX) for MICCAI
0 0 00
afids/afids-education
This repository will host training modules for placement of the anatomical fiducial protocol
2 0
afids/afids-hbm2019-cover
inkscape files for HBM2019 cover
3 0
afids/AFIDs-HCP
HCP Unrelated 100 Subset (AFIDs-HCP)
1 0
afids/AFIDs-OASIS
Anatomical landmark data curated on a subset of the Open Access Series of Imaging Studies-1 (AFIDs-OASIS)
2 0
afids/afids-regRF
automatic localization of anatomical landmarks using random forest regression
Language:Jupyter Notebook3 41
afids/autoafids_prep
Snakemake workflow to prepare data for afids-CNN project
Language:Python2 31
afids/tpl-MNI152Lin
0 0
afids/tpl-MNI152NLin2009bAsym
0 0
afids/tpl-MNI152NLin2009cAsym
MNI152NLin2009cAsym
0 0
afids/tpl-MNI152NLin2009cSym
0 0
afids/tpl-MNI152NLin6Asym
FSL's modified version (Asymmetric) of the MNI ICBM 152 non-linear 6th Generation Symmetric Average Brain Stereotaxic Registration Model
0 0
afids/tpl-MNI152NLin6Sym
Symmetric MNI152 6th generation template
0 0
afids/tpl-MNI305
0 0
afids/tpl-MNIColin27
1 0