Pinned Repositories
ag-abhishek
Config files for my GitHub profile.
ChiaPET
Scripts for Analyzing ChIA-PET Data
epiRomics
An R package designed to integrate and visualize various levels of epigenomic information, including but not limited to: ChIP, Histone, ATAC, and RNA sequencing. epiRomics is also designed to identify enhancer and enhanceosome regions from these data.
mango
chia pet analysis software
TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
coolpuppy
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
spex
ag-abhishek's Repositories
ag-abhishek/ag-abhishek
Config files for my GitHub profile.
ag-abhishek/ChiaPET
Scripts for Analyzing ChIA-PET Data
ag-abhishek/epiRomics
An R package designed to integrate and visualize various levels of epigenomic information, including but not limited to: ChIP, Histone, ATAC, and RNA sequencing. epiRomics is also designed to identify enhancer and enhanceosome regions from these data.
ag-abhishek/mango
chia pet analysis software
ag-abhishek/TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data