agencyenterprise/neurotechdevkit

Issues

• Time-reverse simulation example doesn't show a reverse-simulation properly

  #171 opened a month ago by charlesbmi
  0

• Click to position target and transducer

  #185 opened a month ago by NewtonSander
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• Introduce 'verbose' parameter for controlling printed output

  #178 opened 10 months ago by stmartin
  0

• Describe how NDK and K-wave are experimentally validated

  #169 opened 10 months ago by charlesbmi
  1

• Multi-GPU simulation example

  #170 opened 10 months ago by charlesbmi
  0

• Add metrics related to targeting/neuromodulation

  #168 opened 10 months ago by charlesbmi
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• Mention the need to install ARM-Conda if running `neurotechdevkit` on a Mac M1/M2

  #167 opened a year ago by charlesbmi
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• Add 'clim' parameters to enable control over the color scale of pressure plots.

  #166 opened a year ago by stmartin
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• Mention the need for `homebrew` in macOS installation instructions

  #165 opened a year ago by charlesbmi
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• `stride` depends on `dash`, which specifies a conflicting `flask<2.3.0` from our web app

  #164 opened a year ago by charlesbmi
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• Add "Fixing Homer" to the NDK Documentation

  #155 opened a year ago by conditg
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• Specify `stride` version or commit-hash

  #142 opened a year ago by charlesbmi
  1

• Describe how to install `en_US` dictionary for `make spellcheck`

  #146 opened a year ago by charlesbmi
  2

• Meaningful names for benchmark scenarios

  #156 opened a year ago by charlesbmi
  2

• [Only in pull request CircleCI-generated docs] Example gallery thumbnails redirect to incorrect links

  #158 opened a year ago by charlesbmi
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• CircleCI-generated gallery examples don't include images

  #141 opened a year ago by charlesbmi
  1

• Better thumbnails for gallery examples

  #157 opened a year ago by charlesbmi
  0

• Add timestamp to each wavefield step in the result object

  #98 opened a year ago by d-lucena
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• add broken link checker to CI

  #143 opened a year ago by d-lucena
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• Create user interface for scenarios exploration

  #101 opened a year ago by d-lucena
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• Add ability to load MRI for material characterization

  #102 opened a year ago by d-lucena
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• Raise error when `center_line` is not perpendicular to the transducer direction for 3D phased arrays

  #97 opened a year ago by d-lucena
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• Update metrics for pulsed simulation

  #100 opened a year ago by d-lucena
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• Add example notebook for creating new material and mask

  #94 opened a year ago by d-lucena
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• Update phased array illustration

  #96 opened a year ago by d-lucena
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• Slice `SteadyStateResult3D` to `SteadyStateResult2D`

  #134 opened a year ago by charlesbmi
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• Ultrasound imaging

  #109 opened a year ago by charlesbmi
  1

• Get correct 2D sources and target when slicing a 3D scenario

  #148 opened a year ago by kylmcgr
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• `poetry install` fails on `pyrevolve==2.2.2` on Python 3.11

  #149 opened a year ago by charlesbmi
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• Use `pint` to keep track of different units

  #133 opened a year ago by charlesbmi
  0

• Add benchmarks for CPU/GPU

  #114 opened a year ago by vaiana
  3

• Doppler effect example

  #129 opened a year ago by charlesbmi
  1

• Warn user when the scenario material masks have issues

  #135 opened a year ago by NewtonSander
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• Scenario 2 errors out with a different center-frequency/grid-size due to mismatch in material mask / grid size

  #128 opened a year ago by charlesbmi
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• Improve memory-usage estimation

  #140 opened a year ago by charlesbmi
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• implement a surrogate model example using NDK data

  #139 opened a year ago by d-lucena
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• Keep log-level with `stride` logs

  #137 opened a year ago by charlesbmi
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• Add `napari` to Python dependency `[extras]`

  #130 opened a year ago by charlesbmi
  1

• Add an example for defining delays for phased array element through a "time reverse" simulation

  #95 opened a year ago by d-lucena
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• Add GPU compatible DockerFile

  #112 opened a year ago by vaiana
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• Linting not applied to examples code

  #93 opened a year ago by d-lucena
  1

• Napari failing to install (Macbook M1)

  #119 opened a year ago by conditg
  2

• Zipped jupyter notebook gallery missing images

  #118 opened a year ago by conditg
  0

• Add displacement and cavitation simulations

  #116 opened a year ago by charlesbmi
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• Add thermal modeling

  #115 opened a year ago by d-lucena
  1

• Add imaging-guided tFUS targeting

  #117 opened a year ago by charlesbmi
  0

• Simulate pulse and then simulate steady-state without needing to reinitialize scenario

  #108 opened a year ago by charlesbmi
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• `ffmpeg` required for example notebooks but not installed in docker container

  #106 opened a year ago by charlesbmi
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• Should Jupyter notebooks persist to `/app/notebooks` instead?

  #104 opened a year ago by charlesbmi
  0

• Simulation wavefield timestep 0 has no data

  #99 opened a year ago by d-lucena
  0