aghaeifar
Exploring endless world of magnetic resonance imaging.
Max Planck Institute for Biological CyberneticsTübingen
Pinned Repositories
aghaeifar
Ali Aghaeifar's profile page
bet2
MATLAB mex interface and Python wrapper for standalone Brain Extraction Tool (bet2),
Biot-Savart
Simulation of Biot-Savart law - Analytical solution to calculate magnetic field of an arbitrarily shaped coil. MATLAB and Python interface are provided.
pyshim
Python-powered toolkit for shimming of B0 and B1 fields in MRI
recoMRD
Python scripts to read and reconstruct ismrmrd (mrd) format
RecoTwix
scripts for reconstruction of MRI data from Siemens rawdata files (twix)
SpinWalk
SpinWalk, a framework for Monte-Carlo simulation to model spins random walk within a microvascular network. SpinWalk can be also employed to simulate diffusion in a microstructure substrates.
TurboBloch
Implementation of Bloch equation simulator for magnetic resonance imaging (MRI) sequences
twixtools
python file reader/writer for Siemens MRI raw data + compression utility
vini
viewer for MRI data & numpy arrays
aghaeifar's Repositories
aghaeifar/recoMRD
Python scripts to read and reconstruct ismrmrd (mrd) format
aghaeifar/SpinWalk
SpinWalk, a framework for Monte-Carlo simulation to model spins random walk within a microvascular network. SpinWalk can be also employed to simulate diffusion in a microstructure substrates.
aghaeifar/RecoTwix
scripts for reconstruction of MRI data from Siemens rawdata files (twix)
aghaeifar/Biot-Savart
Simulation of Biot-Savart law - Analytical solution to calculate magnetic field of an arbitrarily shaped coil. MATLAB and Python interface are provided.
aghaeifar/bet2
MATLAB mex interface and Python wrapper for standalone Brain Extraction Tool (bet2),
aghaeifar/TurboBloch
Implementation of Bloch equation simulator for magnetic resonance imaging (MRI) sequences
aghaeifar/aghaeifar
Ali Aghaeifar's profile page
aghaeifar/pyshim
Python-powered toolkit for shimming of B0 and B1 fields in MRI
aghaeifar/twixtools
python file reader/writer for Siemens MRI raw data + compression utility
aghaeifar/vini
viewer for MRI data & numpy arrays