scRNA-seq - Find Markers identifies genes that are differentially expressed among clusters
in single cell RNA-seq data.
| Input projection | Description |
|---|---|
y-axis |
numeric, logged and normalised count data, per cell |
colors |
character, cluster ID |
columns |
character, cell ID |
rows |
character, gene ID |
The operator uses the Seurat R package and the preprocessing workflow described in the "package website".
Hao, Y., Hao, S., Andersen-Nissen, E., Mauck, W. M., Zheng, S., Butler, A., ... & Satija, R. (2021). Integrated analysis of multimodal single-cell data. Cell, 184(13), 3573-3587.