ahmadpgh
Machine Learning Scientist; Deep Learning, Bioinformatics, and Natural Language Processing Enthusiast
Drug Design IndustryToronto, ON, Canada
Pinned Repositories
awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
ColabDesign
Making Protein Design accessible to all via Google Colab!
convnet-benchmarks
Easy benchmarking of all publicly accessible implementations of convnets
deepSimDEF
deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene products (RNAs, proteins, etc).
FIDDLE
Flexible Integration of Data with Deep LEarning
numerical-linear-algebra
Free online textbook of Jupyter notebooks for fast.ai Computational Linear Algebra course
nvidia-docker
Build and run Docker containers leveraging NVIDIA GPUs
seq2seq
A general-purpose encoder-decoder framework for Tensorflow
simDEF
simDEF is an NLP-based model for gene function analysis using Gene Ontology annotations of gene products and proteins.
deepBioWSD
deepBioWSD is a single Bidirectional Long Short-Term Memory (BLSTM) network for deep word sense disambiguation (WSD) of biomedical text data collectively.
ahmadpgh's Repositories
ahmadpgh/deepSimDEF
deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene products (RNAs, proteins, etc).
ahmadpgh/simDEF
simDEF is an NLP-based model for gene function analysis using Gene Ontology annotations of gene products and proteins.
ahmadpgh/numerical-linear-algebra
Free online textbook of Jupyter notebooks for fast.ai Computational Linear Algebra course
ahmadpgh/awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
ahmadpgh/ColabDesign
Making Protein Design accessible to all via Google Colab!
ahmadpgh/convnet-benchmarks
Easy benchmarking of all publicly accessible implementations of convnets
ahmadpgh/FIDDLE
Flexible Integration of Data with Deep LEarning
ahmadpgh/nvidia-docker
Build and run Docker containers leveraging NVIDIA GPUs
ahmadpgh/seq2seq
A general-purpose encoder-decoder framework for Tensorflow
ahmadpgh/deeplearning-biology
A list of deep learning implementations in biology
ahmadpgh/DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
ahmadpgh/DRKG
A knowledge graph and a set of tools for drug repurposing
ahmadpgh/gpss
Gaussian process material for summer school teaching.
ahmadpgh/ImaGene
ahmadpgh/incubator-mxnet
Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Scala, Go, Javascript and more
ahmadpgh/ipython-in-depth
IPython in-depth Tutorial, first presented at PyCon 2012
ahmadpgh/kaldi
This is now the official location of the Kaldi project.
ahmadpgh/pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
ahmadpgh/pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
ahmadpgh/PyTorchTextClassificationCustomDataset
In this repository i explain how you can implement a text classifier on custom dataset using PyTorch
ahmadpgh/snorkel
A training data creation and management system focused on information extraction
ahmadpgh/tensor2tensor
A library for generalized sequence to sequence models
ahmadpgh/tensorflow
Computation using data flow graphs for scalable machine learning
ahmadpgh/TensorFlow-Examples
TensorFlow Tutorial and Examples for beginners
ahmadpgh/the-incredible-pytorch
The Incredible PyTorch: a curated list of tutorials, papers, projects, communities and more relating to PyTorch.
ahmadpgh/tornado
The Tornado :tornado: framework, designed and implemented for adaptive online learning and data stream mining in Python.