Pinned Repositories
AI-Immersion-Workshop
Workshop materials from the AI Immersion Workshop, for attendees to access and use
ai4pharma.github.io
Build a Jekyll blog in minutes, without touching the command line.
AWS-BigData-Certification
Notes I prepared while studying and researching for AWS Big Data certification
AWS-Certification-Preparation
Prepare the AWS Certified Solutions Architect - Associate examination
Cell-Type-Deconvolution
CIBERSORT
Deep-Learning-for-Medical-Applications
Deep Learning Papers on Medical Image Analysis
deep-mil-for-whole-mammogram-classification
Zhu, Wentao, Qi Lou, Yeeleng Scott Vang, and Xiaohui Xie. "Deep Multi-instance Networks with Sparse Label Assignment for Whole Mammogram Classification." MICCAI 2017.
DeepLung
WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"
genetic-evidence-approval
ai4pharma's Repositories
ai4pharma/AI-Immersion-Workshop
Workshop materials from the AI Immersion Workshop, for attendees to access and use
ai4pharma/ai4pharma.github.io
Build a Jekyll blog in minutes, without touching the command line.
ai4pharma/AWS-BigData-Certification
Notes I prepared while studying and researching for AWS Big Data certification
ai4pharma/AWS-Certification-Preparation
Prepare the AWS Certified Solutions Architect - Associate examination
ai4pharma/Cell-Type-Deconvolution
ai4pharma/CIBERSORT
ai4pharma/Deep-Learning-for-Medical-Applications
Deep Learning Papers on Medical Image Analysis
ai4pharma/deep-mil-for-whole-mammogram-classification
Zhu, Wentao, Qi Lou, Yeeleng Scott Vang, and Xiaohui Xie. "Deep Multi-instance Networks with Sparse Label Assignment for Whole Mammogram Classification." MICCAI 2017.
ai4pharma/DeepLung
WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"
ai4pharma/genetic-evidence-approval
ai4pharma/gennotes
GenNotes – public consensus annotation of genetic variants
ai4pharma/HGDP_PopStruct_Exercise
A classroom exercise using HGDP SNP data to introduce population structure concepts
ai4pharma/image-classification-cervical-cancer
Repository for Kaggle's competition: "Intel and Mobile ODT Cervical Cancer Screening"
ai4pharma/inferCNV
Inferring CNV from Single-Cell RNA-Seq
ai4pharma/medical-imaging-datasets
A list of Medical imaging datasets. Source : https://sites.google.com/site/aacruzr/image-datasets
ai4pharma/omic-features-successful-targets
Data and code supporting "Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets" by Andrew D. Rouillard, Mark R. Hurle, and Pankaj Agarwal. https://www.biorxiv.org/content/early/2017/11/16/220848.
ai4pharma/pathway-figure-ocr
Extracting gene sets from pubilshed pathway figures
ai4pharma/RNAseq-ASHG19
RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows
ai4pharma/seq2seq
A general-purpose encoder-decoder framework for Tensorflow
ai4pharma/spotr
Launch, snapshot and destroy AWS spot instances
ai4pharma/the-unix-workbench
:house_with_garden: A Book for Anyone to Get Started with Unix
ai4pharma/utilities
misc codes for different purpose