aidanfoo96
PhD student at the Liverpool School of Tropical Medicine. Mosquito microbiomes and microbial genomics
Liverpool
Pinned Repositories
aa_read_classification_from_WGS
aedes_aegypti_microbiota_read_classification
aidanfoo96
Config files for my GitHub profile.
e.coli_efflux_transporter_diversity
Scripts written for my analyses of E. coli efflux transporter diversity
MINUUR
Pipeline to pull microbial reads from WGS data and perform metagenomic analysis
MosAIC_BGC
Analysis of biosynthetic gene cluster diversity in mosquito-associated genomes
MosAICMINUUR_BGC
Chapter 4 thesis - exploring BGC diversity in mosquito-derived genomes and their role in Ae. aegypti colonisation
MosBacFe
A snakemake pipeline to used to study iron-acquisition potential of the mosquito microbiome
Pangenomelord
A snakemake pipeline for running Prokka and Roary
MosAIC_V1
aidanfoo96's Repositories
aidanfoo96/MINUUR
Pipeline to pull microbial reads from WGS data and perform metagenomic analysis
aidanfoo96/aa_read_classification_from_WGS
aidanfoo96/aedes_aegypti_microbiota_read_classification
aidanfoo96/aidanfoo96
Config files for my GitHub profile.
aidanfoo96/e.coli_efflux_transporter_diversity
Scripts written for my analyses of E. coli efflux transporter diversity
aidanfoo96/MosAIC_BGC
Analysis of biosynthetic gene cluster diversity in mosquito-associated genomes
aidanfoo96/MosBacFe
A snakemake pipeline to used to study iron-acquisition potential of the mosquito microbiome
aidanfoo96/Pangenomelord
A snakemake pipeline for running Prokka and Roary