Pinned Repositories
rf_diffusion_all_atom
Public RFDiffusionAA repo
PeptideModels
Code for peptide ligand design with machine learning models.
_2023_Pesce_IDPdesign
PTMGPT2
GPT-based protein language model for PTM site prediction
ProteinMPNN
Code for the ProteinMPNN paper
Protenix
A trainable PyTorch reproduction of AlphaFold 3.
chai-lab
Chai-1, SOTA model for biomolecular structure prediction
boltz
Official repository for the Boltz-1 biomolecular interaction model
BindCraft
User friendly and accurate binder design pipeline
ThermoMPNN-D
Extension of ThermoMPNN for double mutant predictions
AI Proteins's Repositories
aiproteins/boltz
Official repository for the Boltz-1 biomolecular interaction model
aiproteins/Protenix
A trainable PyTorch reproduction of AlphaFold 3.
aiproteins/chai-lab
Chai-1, SOTA model for biomolecular structure prediction
aiproteins/BindCraft
User friendly and accurate binder design pipeline
aiproteins/ThermoMPNN-D
Extension of ThermoMPNN for double mutant predictions
aiproteins/RFdiffusion
Code for running RFdiffusion
aiproteins/PTMGPT2
GPT-based protein language model for PTM site prediction
aiproteins/PeptideModels
Code for peptide ligand design with machine learning models.
aiproteins/_2023_Pesce_IDPdesign
aiproteins/RoseTTAFold-All-Atom
aiproteins/rf_diffusion_all_atom
Public RFDiffusionAA repo
aiproteins/ThermoMPNN
GNN trained to predict changes in thermodynamic stability for protein point mutants
aiproteins/LigandMPNN
aiproteins/protein_generator
Joint sequence and structure generation with RoseTTAFold sequence space diffusion
aiproteins/RoseTTAFold2
aiproteins/RoseTTAFold2NA
RoseTTAFold2 protein/nucleic acid complex prediction
aiproteins/ProteinMPNN
Code for the ProteinMPNN paper
aiproteins/DSBPredict