ait5

@tempuslabsNew York, NY

Pinned Repositories

CH_Ancestry__Menghrajani-FranchExposito
Code repository for paper "Clonal Hematopoiesis Prevalence Varies by Genetic Ancestry in Patients With Solid Tumors" by Menghrajani & Franch-Exposito et al
Language:R0 1 00
CNApp
CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-friendly interface. The software uses segmented data from either aCGH, SNP-array, whole-exome sequencing or whole-genome sequencing to assess sample profiles and CNA levels, establishing associations with molecular and clinical features. CNApp has three main sections: Re-Seg & Score, Region profile and Classifier model
Language:R18 2 67
Exercice_7
Ejercicio 7 del curso de Biotools
Language:R0 1 00
facets
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
Language:R00
Gao_NC_CH
Code and Data for Gao et al., Nature Communications 2021
Language:Jupyter Notebook00
padcas_test
0 1 00
test
repositorio de ejemplo creado durante el curso de Bioherramientas y Bioestadística (ISGlobal-PRBB)
00
test-repo
This is a test repository
00
unit-testing-seminar
Unit Testing for Reproducible Science seminar at Sloan Kettering
Language:Python0 0 00
musica
MuSiCa - Mutational Signatures in Cancer
Language:R2313

ait5/CNApp
CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-friendly interface. The software uses segmented data from either aCGH, SNP-array, whole-exome sequencing or whole-genome sequencing to assess sample profiles and CNA levels, establishing associations with molecular and clinical features. CNApp has three main sections: Re-Seg & Score, Region profile and Classifier model
Language:R18 2 67
ait5/CH_Ancestry__Menghrajani-FranchExposito
Code repository for paper "Clonal Hematopoiesis Prevalence Varies by Genetic Ancestry in Patients With Solid Tumors" by Menghrajani & Franch-Exposito et al
Language:R0 1 00
ait5/Exercice_7
Ejercicio 7 del curso de Biotools
Language:R0 1 00
ait5/facets
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
Language:R00
ait5/Gao_NC_CH
Code and Data for Gao et al., Nature Communications 2021
Language:Jupyter Notebook00
ait5/padcas_test
0 1 00
ait5/test
repositorio de ejemplo creado durante el curso de Bioherramientas y Bioestadística (ISGlobal-PRBB)
00
ait5/test-repo
This is a test repository
00
ait5/unit-testing-seminar
Unit Testing for Reproducible Science seminar at Sloan Kettering
Language:Python0 0 00