Pinned Repositories
aiyacharley
BioTools_Doc
BioTools web app help documents
ClassifyBySeq
Classify barcode+primer sequence to different sample
ImmunoRepertoireGeneralAnalyse
Antibody repertoire analysis
ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
PrepareFiles4RCircos
When we want to plot a circos figures to represent several genes or other labels's count and their relation, I write a python script to process data to prepare files for RCircos.
TextEncrypt
VectorDist
Calculate the dist between two vector
GDBIGtools
GDBIGtools: A command line tools for GDBIG varaints browser
phimtools
A phasing and imputation pipeline for NGS data
aiyacharley's Repositories
aiyacharley/PrepareFiles4RCircos
When we want to plot a circos figures to represent several genes or other labels's count and their relation, I write a python script to process data to prepare files for RCircos.
aiyacharley/ClassifyBySeq
Classify barcode+primer sequence to different sample
aiyacharley/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
aiyacharley/TextEncrypt
aiyacharley/VectorDist
Calculate the dist between two vector
aiyacharley/aiyacharley
aiyacharley/BioTools_Doc
BioTools web app help documents
aiyacharley/ImmunoRepertoireGeneralAnalyse
Antibody repertoire analysis
aiyacharley/cdhit
Automatically exported from code.google.com/p/cdhit
aiyacharley/ChromoPainter
aiyacharley/ChromoPainterV2
aiyacharley/DARTS
Deep-learning Augmented RNA-seq analysis of Transcript Splicing
aiyacharley/DeepOmix
A Multi-Omics Scalable and Interpretable Deep Learning Framework and Application in Cancer Survival Prediction
aiyacharley/EasyOCR
Ready-to-use OCR with 80+ supported languages and all popular writing scripts including Latin, Chinese, Arabic, Devanagari, Cyrillic and etc.
aiyacharley/fastGLOBETROTTER
faster haplotype-based admixture inference and dating software
aiyacharley/GLOBETROTTER
haplotype-based admixture inference and dating software
aiyacharley/haplogrep-cmd
HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
aiyacharley/MetaMinimac2
aiyacharley/MicrobiotaProcess
:microbe: A comprehensive R package for deep mining microbiome
aiyacharley/ollama
Get up and running with Llama 2, Mistral, Gemma, and other large language models.
aiyacharley/PlotCloneStream
If you sampling clone data more than once from one samples, this python script would help you plot a dynamic clone stream.
aiyacharley/practicalAI
A practical approach to learning machine learning.
aiyacharley/vcf_to_chromopainter
basic tool to convert from phased vcf to chromopainter format
aiyacharley/YhaploInfer