Pinned Repositories
16S_workflow_cardenas
Aiptasia_microbiome_manipulation
Aiptasia_salinity_thermotolerance_16S
ajcardenasb.github.io
Algal-bacteria_co-occurences_DATA793
Coral_endoliths
light_pollution
Red_Sea_virome
This repository contains the scripts used to analyze data and create figures for the manuscript “Coral-associated viral assemblages from the central Red Sea align with host species and contribute to the holobiont’s bacterial virulence”
RSS_CBASS_16S
Scripts for cDNA-based 16S rRNA amplicon data analysis of Stylophora pistillata in response to short-term (18 hours) and long-term (14 days) heat stress from the paper: "Fast and pervasive transcriptomic resilience and acclimation of extremely heat tolerant coral holobionts from the northern Red Sea"
Tridacna_microbiome
Scripts and pipelines used for describing bacterial diversity in Tridacna.
ajcardenasb's Repositories
ajcardenasb/Coral_endoliths
ajcardenasb/Tridacna_microbiome
Scripts and pipelines used for describing bacterial diversity in Tridacna.
ajcardenasb/Red_Sea_virome
This repository contains the scripts used to analyze data and create figures for the manuscript “Coral-associated viral assemblages from the central Red Sea align with host species and contribute to the holobiont’s bacterial virulence”
ajcardenasb/light_pollution
ajcardenasb/RSS_CBASS_16S
Scripts for cDNA-based 16S rRNA amplicon data analysis of Stylophora pistillata in response to short-term (18 hours) and long-term (14 days) heat stress from the paper: "Fast and pervasive transcriptomic resilience and acclimation of extremely heat tolerant coral holobionts from the northern Red Sea"
ajcardenasb/16S_workflow_cardenas
ajcardenasb/Aiptasia_microbiome_manipulation
ajcardenasb/Aiptasia_salinity_thermotolerance_16S
ajcardenasb/ajcardenasb.github.io
ajcardenasb/Algal-bacteria_co-occurences_DATA793
ajcardenasb/Brazilian_SuperCorals_field
ajcardenasb/CBASSvsCLASSIC
Compared responses of coral holobiont to short term acute heat stress and long term heat stress
ajcardenasb/coral_deoxygenation_RNASeq
ajcardenasb/coral_microbiome_ontogeny
ajcardenasb/FOAM
script to run FOAM
ajcardenasb/phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
ajcardenasb/Red-Sea-RADSeq
ajcardenasb/VTK_2021
16S rRNA ASV analysis
ajcardenasb/VTK_2022