akahles

Pinned Repositories

icgc-rna-seq-processing-tools
Language:Dockerfile00
icgc_rnaseq_align
Language:Python17 5 07
libmaus2
collection of data structures and algorithms
Language:C++0 4 01
records
SQL for Humans™
Language:Python00
pcawg3-rnaseq-align-star
Scripts for RNA-Seq alignments using STAR
Language:Python6 7 01
metagraph
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
Language:C++110 16 7617
mmr
A tool for Read Multi-Mapper Resolution
Language:C++24 6 60
pancanatlas_code_public
Public repository containing research code for the TCGA PanCanAtlas Splicing project
Language:Python41 27 616
spladder
Tool for the detection and quantification of alternative splicing events from RNA-Seq data.
Language:Python103 15 19133
tensor-sketch-alignment
Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.
Language:C++13 6 30

akahles's Repositories

akahles/icgc_rnaseq_align
Language:Python17 5 07
akahles/icgc-rna-seq-processing-tools
Language:Dockerfile00
akahles/libmaus2
collection of data structures and algorithms
Language:C++0 4 01
akahles/records
SQL for Humans™
Language:Python00