Pinned Repositories
AD_finemap
Code supporting analyses in paper on fine-mapping AD loci
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
cardiogramplusC4D_GWAS
cheatsheets
RStudio Cheat Sheets
ColocQuiaL
Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
dalys_code
DITTO
Variant Deleteriousness prediction tool using AI
FM-pipeline
A Fine-Mapping pipeline
Heritability_WGS
This repository contains the code used for estimating heritability from WGS data
HeriVar
Quantifying the combined heritability of a trait based on a multi-ethnic LD panel with equal distribution of samples among each ancestry group.
akhilpampana's Repositories
akhilpampana/Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
akhilpampana/cardiogramplusC4D_GWAS
akhilpampana/cheatsheets
RStudio Cheat Sheets
akhilpampana/ColocQuiaL
Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
akhilpampana/dalys_code
akhilpampana/DITTO
Variant Deleteriousness prediction tool using AI
akhilpampana/Heritability_WGS
This repository contains the code used for estimating heritability from WGS data
akhilpampana/freq-ancestry
akhilpampana/gcp-for-bioinformatics
GCP for Bioinformatics Researchers
akhilpampana/glgc_biology_paper
Scripts used for the manuscript "Implicating genes, pleiotropy and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis"
akhilpampana/gnomad-browser
Explore gnomAD datasets on the web
akhilpampana/HARE
Harmonizing genetic ancestry and self-identified race/ethnicity
akhilpampana/hgdp_tgp
akhilpampana/NIGMS-Sandbox
Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NIH
akhilpampana/Nirvana
The nimble & robust variant annotator
akhilpampana/OlinkRPackage_v1
Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users extract biological insights from proteomic data run on the Olink platform.
akhilpampana/Park-Nature-Genetics-2024
akhilpampana/PGS_Catalog
An open database of polygenic scores and relevant metadata needed to apply and evaluate them correctly.
akhilpampana/pheweb
A tool to build a website to browse hundreds or thousands of GWAS.
akhilpampana/PredLMM
akhilpampana/rfmix
RFMIX - Local Ancestry and Admixture Inference Version 2
akhilpampana/robustbase
:exclamation: This is a read-only mirror of the CRAN R package repository. robustbase — Basic Robust Statistics. Homepage: https://robustbase.R-forge.R-project.org/ Report bugs for this package: https://R-forge.R-project.org/tracker/?atid=302&group_id=59
akhilpampana/rx
a minimal reactive framework that borrows general ideas from React and Vue-related libraries
akhilpampana/SAIGEgds
Scalable Implementation of generalized mixed models using GDS files in Phenome-Wide Association Studies
akhilpampana/ST.Jude_Assignments
Assignments regarding STJude
akhilpampana/ST.Jude_Assignments_v1
Assignment_Repository
akhilpampana/StrVCTVRE
StrVCTVRE, a structural variant classifier for exonic deletions and duplications
akhilpampana/team-leaders-2022
A repository to share resources and a readiness checklist with team leaders.
akhilpampana/Test
akhilpampana/ukbb_pan_ancestry
Analyses conducting GWAS across the UKBB diverse superpopulations