Pinned Repositories
afni
Official AFNI source and documentation
ANTsPyNet
Medical image analysis framework merging ANTsPy and deep learning
autoCV
automatic generation of CV
bids2nda
A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
bidsconvert
Stripped down port of `fiuneuro/cis-bidsify`
brainconn
A Python implementation of the brain connectivity toolbox.
cis-bidsify
Tools for Singularity- and heudiconv-based BIDSification and anonymization of MRI data optimized for the FIU HPC.
fiu_bootcamp_preproc
happy_vis
localizer-task
M1/V1/A1 localizer task
akimbler's Repositories
akimbler/happy_vis
akimbler/afni
Official AFNI source and documentation
akimbler/ANTsPyNet
Medical image analysis framework merging ANTsPy and deep learning
akimbler/autoCV
automatic generation of CV
akimbler/bids2nda
A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
akimbler/bidsconvert
Stripped down port of `fiuneuro/cis-bidsify`
akimbler/cis-bidsify
Tools for Singularity- and heudiconv-based BIDSification and anonymization of MRI data optimized for the FIU HPC.
akimbler/cis-bidsutils
Miscellaneous functions for working with BIDS datasets
akimbler/cis-processing
Automated transfer, conversion, and processing of data acquired at the FIU Center for Imaging Science.
akimbler/cis-xget
Singularity image to download data from XNAT servers.
akimbler/diss_proposal
akimbler/file_opening_presentation
akimbler/fitlins
Fit Linear Models to BIDS Datasets
akimbler/fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
akimbler/fsl_docker
akimbler/gitignore
A collection of useful .gitignore templates
akimbler/heudiconv
A flexible DICOM converter for organizing brain imaging data into structured directory layouts
akimbler/madlab_env
akimbler/nilearn
Machine learning for NeuroImaging in Python
akimbler/NiMARE
Coordinate- and image-based meta-analysis in Python
akimbler/nipype
Workflows and interfaces for neuroimaging packages
akimbler/nistats
Modeling and statistical inference on fMRI data in Python
akimbler/Papaya
A pure JavaScript medical research image viewer.
akimbler/program-wiki
Wiki for FIU cognitive neuroscience.
akimbler/pycodebook
akimbler/pydra-tutorial
Pydra tutorial
akimbler/pyfLoc
A PsychoPy implementation of the Stanford VPN lab's functional localizer task
akimbler/styles
Official repository for Citation Style Language (CSL) citation styles.
akimbler/tedana
TE-dependent analysis of multi-echo fMRI
akimbler/yuzu
Nintendo Switch emulator