akiranishii
I'm an engineer interested in teaching machines how to think like a biologist. Made in 🇯🇵
Pinned Repositories
rnaseq-pipeline
The RNA sequencing (RNA-Seq) pipeline processes sequencing data to estimate transcript abundance and identify differentially expressed transcripts across samples. There are various tools that can be used to achieve similar results, though this program will make use of tools optimized for use in the MacDougald laboratory at the University of Michigan, Ann Arbor.
scrape-pdfs
Metadata-Level-Multiome-Data-Integration-Tool
Metadata Level Multiome Data Integration Tool
personal_website_v2
eurobarometer_search_tool
HINTS_2020_analysis_scripts
R Scripts for HINTS 2020 analysis
ai_voice_assistant
AI voice assistant
akiranishii
Config files for my GitHub profile.
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
chatbot-ui
An open source ChatGPT UI.
akiranishii's Repositories
akiranishii/scProportionTest
scProportionTest modified to add additional parameters
akiranishii/omics_data_integration_tool
Simple tool to integrate Omics datasets at the metadata level
akiranishii/jupyter-ai
A generative AI extension for JupyterLab
akiranishii/personal_website
personal website repo
akiranishii/grind75
Completing grind75 questions with a friend
akiranishii/rnaseq-pipeline
The RNA sequencing (RNA-Seq) pipeline processes sequencing data to estimate transcript abundance and identify differentially expressed transcripts across samples. There are various tools that can be used to achieve similar results, though this program will make use of tools optimized for use in the MacDougald laboratory at the University of Michigan, Ann Arbor.
akiranishii/targeted_mutagenesis
The goal is to introduce targeted mutations in a protein by using expanded genetic code, where a mixture of bases is present at a certain position.
akiranishii/Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
akiranishii/reddit_scrape_tutorial
Tutorial on how to scrape data from reddit
akiranishii/Metadata-Level-Multiome-Data-Integration-Tool
Metadata Level Multiome Data Integration Tool
akiranishii/HINTS_2020_analysis_scripts
R Scripts for HINTS 2020 analysis
akiranishii/eurobarometer_search_tool
akiranishii/personal_website_v2
akiranishii/chatbot-ui
An open source ChatGPT UI.
akiranishii/ai_voice_assistant
AI voice assistant
akiranishii/whisper
Robust Speech Recognition via Large-Scale Weak Supervision
akiranishii/fastbook
The fastai book, published as Jupyter Notebooks
akiranishii/fastai_notebooks
Store all fastai notebooks
akiranishii/scrape-pdfs
akiranishii/rosalind
rosalind problem sets
akiranishii/JavaScript30
30 Day Vanilla JS Challenge
akiranishii/YouTube-I-mostly-use-colab-now-
The Repository for all code I use in my Data Science and Machine Learning Tutorials on YouTube
akiranishii/Etch-A-Sketch
Build a browser version of something between a sketchpad and an Etch-A-Sketch.
akiranishii/PROJECT-ROCK-PAPER-SCISSORS
First javascript project for the Odin Project
akiranishii/akiranishii
Config files for my GitHub profile.
akiranishii/javascript-exercises
These JavaScript exercises are intended to complement the JavaScript content on The Odin Project (TOP). They should only be done when instructed during the course of the curriculum.
akiranishii/practice_website
Practice website for the Odin Project
akiranishii/css-exercises
Odin Project CSS Exercises
akiranishii/odin-recipes
Odin Project 1
akiranishii/git_tests
Git hub repo test