alberto-valdeolivas

Postdoc at Saez Lab

Heidelberg, Germany

Pinned Repositories

alberto-valdeolivas.github.io
Personal Website
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BioC2016Introduction
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CARNIVAL
CAusal Reasoning for Network Identification with integer VALue programming in R
Language:R00
CARNIVAL-Bioconductor-Dev
Provisional repository for the development of CARNIVAL package for Bioconductor
Language:R0 0 00
dorothea
R package to access DoRothEA's regulons
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DoRothEA_Vignette
Vignette describing how to run VIPER coupled with DoRothEA regulons on single cell RNAseq data
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MolTi
community detection in multiplex networks
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RandomWalkRestartMH
A package to perform Random Walk with Restart on different types of networks
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RWR-MH
Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
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ST_CRC_CMS
This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics technology
Language:Jupyter Notebook42

alberto-valdeolivas/RWR-MH
Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
Language:R32 1 314
alberto-valdeolivas/RandomWalkRestartMH
A package to perform Random Walk with Restart on different types of networks
Language:R17 1 510
alberto-valdeolivas/ST_CRC_CMS
This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics technology
Language:Jupyter Notebook42
alberto-valdeolivas/alberto-valdeolivas.github.io
Personal Website
Language:HTML00
alberto-valdeolivas/BioC2016Introduction
00
alberto-valdeolivas/CARNIVAL
CAusal Reasoning for Network Identification with integer VALue programming in R
Language:R00
alberto-valdeolivas/CARNIVAL-Bioconductor-Dev
Provisional repository for the development of CARNIVAL package for Bioconductor
Language:R0 0 00
alberto-valdeolivas/dorothea
R package to access DoRothEA's regulons
Language:R00
alberto-valdeolivas/DoRothEA_Vignette
Vignette describing how to run VIPER coupled with DoRothEA regulons on single cell RNAseq data
Language:HTML01
alberto-valdeolivas/MolTi
community detection in multiplex networks
Language:HTML00
alberto-valdeolivas/OmnipathR
utility functions to work with Omnipath in R
Language:R
alberto-valdeolivas/ProgenyVignette
Data for the Progeny Vignette
alberto-valdeolivas/Tumor-Deconvolution-Challenge-Workflow