Pinned Repositories
dada2_guidelines
A repository with a general dada2 pipeline for amplicon processing
eukaryotesV4
Curated database of V4 region of 18S rDNA
Malaspina_Euk_mTags
Code and data included in Obiol et al. (2020), "A metagenomic assessment of microbial eukaryotic diversity in the global ocean"
Malaspina_HF
Code and data included in "Oceanic heterotrophic flagellates are dominated by a few widespread taxa"
mast_eukbank
Data and code for "How marine are MAST (Marine Stramenopiles)? A cross-system evaluation"
metaT_bacterivory
Code used for data processing and analyses in "Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory"
mtags_snakemake
Snakemake workflow for mTags extraction and classification
useful-scripts
Scripts that make my life easier
aleixop's Repositories
aleixop/eukaryotesV4
Curated database of V4 region of 18S rDNA
aleixop/Malaspina_Euk_mTags
Code and data included in Obiol et al. (2020), "A metagenomic assessment of microbial eukaryotic diversity in the global ocean"
aleixop/Malaspina_HF
Code and data included in "Oceanic heterotrophic flagellates are dominated by a few widespread taxa"
aleixop/mast_eukbank
Data and code for "How marine are MAST (Marine Stramenopiles)? A cross-system evaluation"
aleixop/metaT_bacterivory
Code used for data processing and analyses in "Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory"
aleixop/mtags_snakemake
Snakemake workflow for mTags extraction and classification
aleixop/useful-scripts
Scripts that make my life easier